Difference between revisions of "TSS:Hg 1015.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=36 |entrez_id=81569 |gc_percent=0.626866 |gene_alias=CT57 |gene_description=actin like 8 |gene_name=ACTL8 |gene_type=protein-cod...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375406.1:0 NM_030812:0 uc001bat.3:0 AK057339:0 BC028909:0 U20582:4 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=0 | ||
|distance_to_tss=36 | |distance_to_tss=36 | ||
| + | |end=17755388 | ||
|entrez_id=81569 | |entrez_id=81569 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=CT57 | |gene_alias=CT57 | ||
|gene_description=actin like 8 | |gene_description=actin like 8 | ||
| − | |gene_name=ACTL8 | + | |gene_id=81569 |
| + | |gene_name=actin like 8 | ||
| + | |gene_source=HGNC:24018 | ||
| + | |gene_symbol=ACTL8 | ||
| + | |gene_synonyms=CT57 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24018 | ||
|nearest_ensembl=ENSG00000117148 | |nearest_ensembl=ENSG00000117148 | ||
|nearest_promoter_id=NM_030812 | |nearest_promoter_id=NM_030812 | ||
|nearest_refseq=NM_030812 | |nearest_refseq=NM_030812 | ||
|nearest_unigene=Hs.2149 | |nearest_unigene=Hs.2149 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=17755309 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000375406.1 NM_030812 uc001bat.3 AK057339 BC028909 | ||
| + | |tss_classification=no | ||
|tss_id=hg_1015.1 | |tss_id=hg_1015.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9H568 | ||
}} | }} | ||
Revision as of 18:46, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375406.1 NM_030812 uc001bat.3 AK057339 BC028909 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000375406.1:0 NM_030812:0 uc001bat.3:0 AK057339:0 BC028909:0 U20582:4 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_030812 |
| Entrez ID: | 81569 |
| Nearest Unigene: | Hs.2149 |
| Nearest Refseq: | NM_030812 |
| Nearest Ensembl: | ENSG00000117148 |
| Gene Name: | actin like 8 |
| Gene Alias: | CT57 |
| Gene Description: | actin like 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
