Difference between revisions of "TSS:Hg 101512.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-158 |entrez_id=101928099 |gc_percent=0.532338 |gene_alias=PCAN-R2 |gene_description=prostate cancer associated transcript 7 (n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance= | ||
|distance_to_tss=-158 | |distance_to_tss=-158 | ||
| + | |end=94554892 | ||
|entrez_id=101928099 | |entrez_id=101928099 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_121566 | |nearest_refseq=NR_121566 | ||
|nearest_unigene=Hs.674409 | |nearest_unigene=Hs.674409 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=94554882 | ||
| + | |strand=- | ||
|tata_box="-36(CAGTATATAAAG,-,0.00)" | |tata_box="-36(CAGTATATAAAG,-,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101512.1 | |tss_id=hg_101512.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:46, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -158 |
|---|---|
| Nearest PromoterID: | NR_121569 |
| Entrez ID: | 101928099 |
| Nearest Unigene: | Hs.674409 |
| Nearest Refseq: | NR_121566 |
| Nearest Ensembl: | ENSG00000231806 |
| Gene Name: | PCAT7 |
| Gene Alias: | PCAN-R2 |
| Gene Description: | prostate cancer associated transcript 7 (non-protein coding) |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(CAGTATATAAAG,-,0.00)" |
