Difference between revisions of "TSS:Hg 101523.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=112 |entrez_id=2203 |gc_percent=0.751244 |gene_alias=FBP |gene_description=fructose-bisphosphatase 1 |gene_name=FBP1 |gene_type...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375326.8:0 uc004auw.5:0 BC012927:0 M19922:0 AK223395:-25 L10320:82 NM_000507:-83 AK316583:-83 AY544122:104 D26054:185 D26055:185 D26056:185 KJ891148:189 KR709624:189 KR709625:189 KR709626:189 KR709627:189 KR712246:189 KR712249:189 CU680450:189 AF073475:194 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=112 | |distance_to_tss=112 | ||
| + | |end=94639558 | ||
|entrez_id=2203 | |entrez_id=2203 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=FBP | |gene_alias=FBP | ||
|gene_description=fructose-bisphosphatase 1 | |gene_description=fructose-bisphosphatase 1 | ||
| − | |gene_name=FBP1 | + | |gene_id=2203 |
| + | |gene_name=fructose-bisphosphatase 1 | ||
| + | |gene_source=HGNC:3606 | ||
| + | |gene_symbol=FBP1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3606 | ||
|nearest_ensembl=ENSG00000165140 | |nearest_ensembl=ENSG00000165140 | ||
|nearest_promoter_id=NM_000507 | |nearest_promoter_id=NM_000507 | ||
|nearest_refseq=NM_000507 | |nearest_refseq=NM_000507 | ||
|nearest_unigene=Hs.494496 | |nearest_unigene=Hs.494496 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=94639500 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375326.8 uc004auw.5 BC012927 M19922 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101523.1 | |tss_id=hg_101523.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P09467 | ||
}} | }} | ||
Revision as of 18:47, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375326.8 uc004auw.5 BC012927 M19922 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000375326.8:0 uc004auw.5:0 BC012927:0 M19922:0 AK223395:-25 L10320:82 NM_000507:-83 AK316583:-83 AY544122:104 D26054:185 D26055:185 D26056:185 KJ891148:189 KR709624:189 KR709625:189 KR709626:189 KR709627:189 KR712246:189 KR712249:189 CU680450:189 AF073475:194 |
TATA-Box annotation
| Distance to TSS: | 112 |
|---|---|
| Nearest PromoterID: | NM_000507 |
| Entrez ID: | 2203 |
| Nearest Unigene: | Hs.494496 |
| Nearest Refseq: | NM_000507 |
| Nearest Ensembl: | ENSG00000165140 |
| Gene Name: | fructose-bisphosphatase 1 |
| Gene Alias: | FBP |
| Gene Description: | fructose-bisphosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
