Difference between revisions of "TSS:Hg 101551.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=135 |entrez_id=2176 |gc_percent=0.61194 |gene_alias=FA3|FAC|FACC |gene_description=Fanconi anemia complementation group C |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FAC= | ||
| + | |FACC= | ||
| + | |all_trans=AK312548:0 AK222871:-88 BC015748:-116 ENST00000289081.7:-119 uc004avh.4:-119 X66893:-119 ENST00000490972.6:-126 ENST00000474949.1:-126 NM_000136:-126 NM_001243744:-126 uc004avi.5:-126 uc064umh.1:-126 AK304887:-126 NM_001243743:311 ENST00000375305.5:340 uc022bkl.2:340 X66894:340 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=135 | |distance_to_tss=135 | ||
| + | |end=95317583 | ||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=FA3|FAC|FACC | |gene_alias=FA3|FAC|FACC | ||
|gene_description=Fanconi anemia complementation group C | |gene_description=Fanconi anemia complementation group C | ||
| − | |gene_name=FANCC | + | |gene_id=2176 |
| + | |gene_name=Fanconi anemia complementation group C | ||
| + | |gene_source=HGNC:3584 | ||
| + | |gene_symbol=FANCC | ||
| + | |gene_synonyms=FA3 FAC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3584 | ||
|nearest_ensembl=ENSG00000158169 | |nearest_ensembl=ENSG00000158169 | ||
|nearest_promoter_id=NM_000136 | |nearest_promoter_id=NM_000136 | ||
|nearest_refseq=NM_000136 | |nearest_refseq=NM_000136 | ||
|nearest_unigene=Hs.494529 | |nearest_unigene=Hs.494529 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=95317564 | ||
| + | |strand=- | ||
| + | |transcript_name=AK312548 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101551.1 | |tss_id=hg_101551.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:48, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK312548 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | AK312548:0 AK222871:-88 BC015748:-116 ENST00000289081.7:-119 uc004avh.4:-119 X66893:-119 ENST00000490972.6:-126 ENST00000474949.1:-126 NM_000136:-126 NM_001243744:-126 uc004avi.5:-126 uc064umh.1:-126 AK304887:-126 NM_001243743:311 ENST00000375305.5:340 uc022bkl.2:340 X66894:340 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NM_000136 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | Fanconi anemia complementation group C |
| Gene Alias: | FA3 |
| Gene Description: | Fanconi anemia complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
