Difference between revisions of "TSS:Hg 101564.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=10663 |entrez_id=5727 |gc_percent=0.353234 |gene_alias=BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11 |gene_description=patched 1 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HPE7= | ||
| + | |NBCCS= | ||
| + | |PTC= | ||
| + | |PTC1= | ||
| + | |PTCH= | ||
| + | |PTCH11= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance= | ||
|distance_to_tss=10663 | |distance_to_tss=10663 | ||
| + | |end=95496538 | ||
|entrez_id=5727 | |entrez_id=5727 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_000264 | |nearest_refseq=NM_000264 | ||
|nearest_unigene=Hs.494538 | |nearest_unigene=Hs.494538 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=95496533 | ||
| + | |strand=- | ||
|tata_box="-6(TTTTTAATAGGC,+,0.00)" | |tata_box="-6(TTTTTAATAGGC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101564.1 | |tss_id=hg_101564.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:48, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 10663 |
|---|---|
| Nearest PromoterID: | NM_001083607 |
| Entrez ID: | 5727 |
| Nearest Unigene: | Hs.494538 |
| Nearest Refseq: | NM_000264 |
| Nearest Ensembl: | ENSG00000185920 |
| Gene Name: | PTCH1 |
| Gene Alias: | BCNS |
| Gene Description: | patched 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-6(TTTTTAATAGGC,+,0.00)" |
