Difference between revisions of "TSS:Hg 101630.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=86 |entrez_id=7507 |gc_percent=0.731343 |gene_alias=XP1|XPAC |gene_description="XPA, DNA damage recognition and repair factor" |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |XPAC= | ||
| + | |all_trans=D14533:0 ENST00000496104.1:3 uc064uqw.1:3 ENST00000462523.5:5 uc064uqu.1:5 KJ892389:6 BT019518:6 DQ893624:6 DQ895423:6 AB590398:6 KC899693:6 ENST00000375128.4:-8 uc004axr.5:-8 BC014965:-8 NM_000380:-60 NR_027302:-60 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=86 | |distance_to_tss=86 | ||
| + | |end=97697349 | ||
|entrez_id=7507 | |entrez_id=7507 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=XP1|XPAC | |gene_alias=XP1|XPAC | ||
|gene_description="XPA, DNA damage recognition and repair factor" | |gene_description="XPA, DNA damage recognition and repair factor" | ||
| − | |gene_name=XPA | + | |gene_id=7507 |
| + | |gene_name="xeroderma pigmentosum, complementation group A" | ||
| + | |gene_source=HGNC:12814 | ||
| + | |gene_symbol=XPA | ||
| + | |gene_synonyms=XP1 XPAC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12814 | ||
|nearest_ensembl=ENSG00000136936 | |nearest_ensembl=ENSG00000136936 | ||
|nearest_promoter_id=NR_027302 | |nearest_promoter_id=NR_027302 | ||
|nearest_refseq=NM_000380 | |nearest_refseq=NM_000380 | ||
|nearest_unigene=Hs.654364 | |nearest_unigene=Hs.654364 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=97697297 | ||
| + | |strand=- | ||
| + | |transcript_name=D14533 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101630.1 | |tss_id=hg_101630.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:51, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | D14533 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | D14533:0 ENST00000496104.1:3 uc064uqw.1:3 ENST00000462523.5:5 uc064uqu.1:5 KJ892389:6 BT019518:6 DQ893624:6 DQ895423:6 AB590398:6 KC899693:6 ENST00000375128.4:-8 uc004axr.5:-8 BC014965:-8 NM_000380:-60 NR_027302:-60 |
TATA-Box annotation
| Distance to TSS: | 86 |
|---|---|
| Nearest PromoterID: | NR_027302 |
| Entrez ID: | 7507 |
| Nearest Unigene: | Hs.654364 |
| Nearest Refseq: | NM_000380 |
| Nearest Ensembl: | ENSG00000136936 |
| Gene Name: | "xeroderma pigmentosum, complementation group A" |
| Gene Alias: | XP1 |
| Gene Description: | "XPA, DNA damage recognition and repair factor" |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
