Difference between revisions of "TSS:Hg 101643.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=97 |entrez_id=51531 |gc_percent=0.646766 |gene_alias=C9orf156|HSPC219|NAP1 |gene_description=tRNA methyltransferase O |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSPC219= | ||
| + | |NAP1= | ||
| + | |all_trans=ENST00000478126.5:0 uc064urc.1:0 ENST00000471580.1:1 uc064ure.1:1 ENST00000455506.1:-10 uc064urf.1:-10 ENST00000375117.8:-13 uc064urd.1:-13 KJ898914:-16 CU678254:-16 DQ892983:-18 DQ896231:-18 ENST00000611338.4:-39 uc064urb.1:-39 AY189280:-39 AF151053:-41 AK309270:-52 BC002863:-73 ENST00000375119.7:-93 NM_016481:-93 uc004axv.2:-93 AK000213:-93 AK302701:-93 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=97 | |distance_to_tss=97 | ||
| + | |end=97922477 | ||
|entrez_id=51531 | |entrez_id=51531 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=C9orf156|HSPC219|NAP1 | |gene_alias=C9orf156|HSPC219|NAP1 | ||
|gene_description=tRNA methyltransferase O | |gene_description=tRNA methyltransferase O | ||
| − | |gene_name=TRMO | + | |gene_id=51531 |
| + | |gene_name=tRNA methyltransferase O | ||
| + | |gene_source=HGNC:30967 | ||
| + | |gene_symbol=TRMO | ||
| + | |gene_synonyms=HSPC219 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30967 | ||
|nearest_ensembl=ENSG00000136932 | |nearest_ensembl=ENSG00000136932 | ||
|nearest_promoter_id=NM_001330725 | |nearest_promoter_id=NM_001330725 | ||
|nearest_refseq=NM_016481 | |nearest_refseq=NM_016481 | ||
|nearest_unigene=Hs.9196 | |nearest_unigene=Hs.9196 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=97922468 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000478126.5 uc064urc.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101643.1 | |tss_id=hg_101643.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:52, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000478126.5 uc064urc.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000478126.5:0 uc064urc.1:0 ENST00000471580.1:1 uc064ure.1:1 ENST00000455506.1:-10 uc064urf.1:-10 ENST00000375117.8:-13 uc064urd.1:-13 KJ898914:-16 CU678254:-16 DQ892983:-18 DQ896231:-18 ENST00000611338.4:-39 uc064urb.1:-39 AY189280:-39 AF151053:-41 AK309270:-52 BC002863:-73 ENST00000375119.7:-93 NM_016481:-93 uc004axv.2:-93 AK000213:-93 AK302701:-93 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_001330725 |
| Entrez ID: | 51531 |
| Nearest Unigene: | Hs.9196 |
| Nearest Refseq: | NM_016481 |
| Nearest Ensembl: | ENSG00000136932 |
| Gene Name: | tRNA methyltransferase O |
| Gene Alias: | C9orf156 |
| Gene Description: | tRNA methyltransferase O |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
