Difference between revisions of "TSS:Hg 101654.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=1526 |entrez_id=10541 |gc_percent=0.800995 |gene_alias=APRIL|PHAPI2|SSP29 |gene_description=acidic nuclear phosphoprotein 32 fa...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PHAPI2= | ||
| + | |SSP29= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance= | ||
|distance_to_tss=1526 | |distance_to_tss=1526 | ||
| + | |end=97984740 | ||
|entrez_id=10541 | |entrez_id=10541 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_006401 | |nearest_refseq=NM_006401 | ||
|nearest_unigene=Hs.730654 | |nearest_unigene=Hs.730654 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=97984725 | ||
| + | |strand=- | ||
|tata_box="-80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00)" | |tata_box="-80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101654.1 | |tss_id=hg_101654.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:52, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1526 |
|---|---|
| Nearest PromoterID: | NM_006401 |
| Entrez ID: | 10541 |
| Nearest Unigene: | Hs.730654 |
| Nearest Refseq: | NM_006401 |
| Nearest Ensembl: | ENSG00000136938 |
| Gene Name: | ANP32B |
| Gene Alias: | APRIL |
| Gene Description: | acidic nuclear phosphoprotein 32 family member B |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-80(GCCCTTTTAAGA,-,0.00),-78(CCTTTTAAGAAG,+,0.00)" |
