Difference between revisions of "TSS:Hg 101702.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.195 |distance_to_tss=107 |entrez_id=203286 |gc_percent=0.850746 |gene_alias=ANKRD14|NPHP16|PKDR1|SAMD6 |gene_description=ankyrin repeat and sterile...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NPHP16= | ||
| + | |PKDR1= | ||
| + | |SAMD6= | ||
| + | |all_trans=ENST00000353234.4:-90 ENST00000471846.1:-90 uc004ayu.4:-90 uc064use.1:-90 NM_173551:-93 CR749467:208 ENST00000634393.1:425 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
| + | |distance=-90 | ||
|distance_to_tss=107 | |distance_to_tss=107 | ||
| + | |end=98796449 | ||
|entrez_id=203286 | |entrez_id=203286 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
|gene_alias=ANKRD14|NPHP16|PKDR1|SAMD6 | |gene_alias=ANKRD14|NPHP16|PKDR1|SAMD6 | ||
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | |gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | ||
| − | |gene_name=ANKS6 | + | |gene_id=203286 |
| + | |gene_name=ankyrin repeat and sterile alpha motif domain containing 6 | ||
| + | |gene_source=HGNC:26724 | ||
| + | |gene_symbol=ANKS6 | ||
| + | |gene_synonyms=FLJ36928 NPHP16 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26724 | ||
|nearest_ensembl=ENSG00000165138 | |nearest_ensembl=ENSG00000165138 | ||
|nearest_promoter_id=NM_173551 | |nearest_promoter_id=NM_173551 | ||
|nearest_refseq=NM_173551 | |nearest_refseq=NM_173551 | ||
|nearest_unigene=Hs.406890 | |nearest_unigene=Hs.406890 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=98796420 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101702.1 | |tss_id=hg_101702.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q68DC2 | ||
}} | }} | ||
Revision as of 18:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1 |
|---|---|
| Distance: | -90 |
| Num_trans: | 7 |
| All_trans: | ENST00000353234.4:-90 ENST00000471846.1:-90 uc004ayu.4:-90 uc064use.1:-90 NM_173551:-93 CR749467:208 ENST00000634393.1:425 |
TATA-Box annotation
| Distance to TSS: | 107 |
|---|---|
| Nearest PromoterID: | NM_173551 |
| Entrez ID: | 203286 |
| Nearest Unigene: | Hs.406890 |
| Nearest Refseq: | NM_173551 |
| Nearest Ensembl: | ENSG00000165138 |
| Gene Name: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Alias: | ANKRD14 |
| Gene Description: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
