Difference between revisions of "TSS:Hg 101730.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=100 |entrez_id=54881 |gc_percent=0.696517 |gene_alias=Ipi1|bA208F1.2 |gene_description=testis expressed 10 |gene_name=TEX10 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB060968:0 AK000294:0 AK298916:0 AK304869:0 AK303662:0 ENST00000374902.8:-38 uc004bas.4:-38 BC030652:41 NM_017746:-76 ENST00000535814.5:283 NM_001161584:283 uc011lvg.3:283 AK302619:283 | ||
| + | |bA208F1.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=100 | |distance_to_tss=100 | ||
| + | |end=100352901 | ||
|entrez_id=54881 | |entrez_id=54881 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=Ipi1|bA208F1.2 | |gene_alias=Ipi1|bA208F1.2 | ||
|gene_description=testis expressed 10 | |gene_description=testis expressed 10 | ||
| − | |gene_name=TEX10 | + | |gene_id=54881 |
| + | |gene_name=testis expressed 10 | ||
| + | |gene_source=HGNC:25988 | ||
| + | |gene_symbol=TEX10 | ||
| + | |gene_synonyms=FLJ20287 Ipi1 bA208F1.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25988 | ||
|nearest_ensembl=ENSG00000136891 | |nearest_ensembl=ENSG00000136891 | ||
|nearest_promoter_id=NM_017746 | |nearest_promoter_id=NM_017746 | ||
|nearest_refseq=NM_017746 | |nearest_refseq=NM_017746 | ||
|nearest_unigene=Hs.494648 | |nearest_unigene=Hs.494648 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=100352853 | ||
| + | |strand=- | ||
| + | |transcript_name=AB060968 AK000294 AK298916 AK304869 AK303662 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101730.1 | |tss_id=hg_101730.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DQR0 B4E149 B7Z9D5 | ||
}} | }} | ||
Revision as of 18:56, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB060968 AK000294 AK298916 AK304869 AK303662 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | AB060968:0 AK000294:0 AK298916:0 AK304869:0 AK303662:0 ENST00000374902.8:-38 uc004bas.4:-38 BC030652:41 NM_017746:-76 ENST00000535814.5:283 NM_001161584:283 uc011lvg.3:283 AK302619:283 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NM_017746 |
| Entrez ID: | 54881 |
| Nearest Unigene: | Hs.494648 |
| Nearest Refseq: | NM_017746 |
| Nearest Ensembl: | ENSG00000136891 |
| Gene Name: | testis expressed 10 |
| Gene Alias: | Ipi1 |
| Gene Description: | testis expressed 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
