Difference between revisions of "TSS:Hg 101741.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=28 |entrez_id=54534 |gc_percent=0.557214 |gene_alias=MRP-L50 |gene_description=mitochondrial ribosomal protein L50 |gene_name=M...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000374865.4:0 uc004bbe.3:0 AK295521:0 AK025643:0 AK000500:0 BC032008:0 JF432491:0 KJ898997:0 NM_019051:-9 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
| + | |end=101398628 | ||
|entrez_id=54534 | |entrez_id=54534 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=MRP-L50 | |gene_alias=MRP-L50 | ||
|gene_description=mitochondrial ribosomal protein L50 | |gene_description=mitochondrial ribosomal protein L50 | ||
| − | |gene_name=MRPL50 | + | |gene_id=54534 |
| + | |gene_name=mitochondrial ribosomal protein L50 | ||
| + | |gene_source=HGNC:16654 | ||
| + | |gene_symbol=MRPL50 | ||
| + | |gene_synonyms=FLJ20493 MRP-L50 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16654 | ||
|nearest_ensembl=ENSG00000136897 | |nearest_ensembl=ENSG00000136897 | ||
|nearest_promoter_id=NM_019051 | |nearest_promoter_id=NM_019051 | ||
|nearest_refseq=NM_019051 | |nearest_refseq=NM_019051 | ||
|nearest_unigene=Hs.288224 | |nearest_unigene=Hs.288224 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=101398590 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374865.4 uc004bbe.3 AK295521 AK025643 AK000500 BC032008 JF432491 KJ898997 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101741.1 | |tss_id=hg_101741.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N5N7 | ||
}} | }} | ||
Revision as of 18:56, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374865.4 uc004bbe.3 AK295521 AK025643 AK000500 BC032008 JF432491 KJ898997 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000374865.4:0 uc004bbe.3:0 AK295521:0 AK025643:0 AK000500:0 BC032008:0 JF432491:0 KJ898997:0 NM_019051:-9 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_019051 |
| Entrez ID: | 54534 |
| Nearest Unigene: | Hs.288224 |
| Nearest Refseq: | NM_019051 |
| Nearest Ensembl: | ENSG00000136897 |
| Gene Name: | mitochondrial ribosomal protein L50 |
| Gene Alias: | MRP-L50 |
| Gene Description: | mitochondrial ribosomal protein L50 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
