Difference between revisions of "TSS:Hg 101762.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=144 |entrez_id=84302 |gc_percent=0.741294 |gene_alias=C9orf125 |gene_description=transmembrane protein 246 |gene_name=TMEM246 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000374847.5:-1 uc064uvp.1:-1 AK313981:-16 ENST00000374848.7:-77 uc004bbm.4:-77 BC006115:-77 NM_001303107:-105 NM_032342:-105 NM_001303108:268 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=-1 | ||
|distance_to_tss=144 | |distance_to_tss=144 | ||
| + | |end=101487116 | ||
|entrez_id=84302 | |entrez_id=84302 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=C9orf125 | |gene_alias=C9orf125 | ||
|gene_description=transmembrane protein 246 | |gene_description=transmembrane protein 246 | ||
| − | |gene_name=TMEM246 | + | |gene_id=84302 |
| + | |gene_name=transmembrane protein 246 | ||
| + | |gene_source=HGNC:28180 | ||
| + | |gene_symbol=TMEM246 | ||
| + | |gene_synonyms=MGC12992 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28180 | ||
|nearest_ensembl=ENSG00000165152 | |nearest_ensembl=ENSG00000165152 | ||
|nearest_promoter_id=NM_001303107 | |nearest_promoter_id=NM_001303107 | ||
|nearest_refseq=NM_032342 | |nearest_refseq=NM_032342 | ||
|nearest_unigene=Hs.388742 | |nearest_unigene=Hs.388742 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=101487037 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374847.5 uc064uvp.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101762.1 | |tss_id=hg_101762.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R188 Q9BRR3 | ||
}} | }} | ||
Revision as of 18:57, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374847.5 uc064uvp.1 |
|---|---|
| Distance: | -1 |
| Num_trans: | 9 |
| All_trans: | ENST00000374847.5:-1 uc064uvp.1:-1 AK313981:-16 ENST00000374848.7:-77 uc004bbm.4:-77 BC006115:-77 NM_001303107:-105 NM_032342:-105 NM_001303108:268 |
TATA-Box annotation
| Distance to TSS: | 144 |
|---|---|
| Nearest PromoterID: | NM_001303107 |
| Entrez ID: | 84302 |
| Nearest Unigene: | Hs.388742 |
| Nearest Refseq: | NM_032342 |
| Nearest Ensembl: | ENSG00000165152 |
| Gene Name: | transmembrane protein 246 |
| Gene Alias: | C9orf125 |
| Gene Description: | transmembrane protein 246 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
