Difference between revisions of "TSS:Hg 101911.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-23200 |entrez_id=11217 |gc_percent=0.412935 |gene_alias=AKAP-2|AKAPKL|MISP2|PRKA2 |gene_description=A-kinase anchoring protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AKAPKL= | ||
| + | |MISP2= | ||
| + | |PRKA2= | ||
| + | |all_trans=ENST00000418441.1:39 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=39 | ||
|distance_to_tss=-23200 | |distance_to_tss=-23200 | ||
| + | |end=110025399 | ||
|entrez_id=11217 | |entrez_id=11217 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_001004065 | |nearest_refseq=NM_001004065 | ||
|nearest_unigene=Hs.591908 | |nearest_unigene=Hs.591908 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=110025396 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000418441.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101911.1 | |tss_id=hg_101911.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:03, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000418441.1 |
|---|---|
| Distance: | 39 |
| Num_trans: | 1 |
| All_trans: | ENST00000418441.1:39 |
TATA-Box annotation
| Distance to TSS: | -23200 |
|---|---|
| Nearest PromoterID: | NM_001004065 |
| Entrez ID: | 11217 |
| Nearest Unigene: | Hs.591908 |
| Nearest Refseq: | NM_001004065 |
| Nearest Ensembl: | ENSG00000241978 |
| Gene Name: | AKAP2 |
| Gene Alias: | AKAP-2 |
| Gene Description: | A-kinase anchoring protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
