Difference between revisions of "TSS:Hg 101918.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-34 |entrez_id=401546 |gc_percent=0.527363 |gene_alias=bA470J20.2 |gene_description=chromosome 9 open reading frame 152 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000400613.4:-11 uc011lwk.3:-11 NM_001012993:24 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-11 | ||
|distance_to_tss=-34 | |distance_to_tss=-34 | ||
| + | |end=110208178 | ||
|entrez_id=401546 | |entrez_id=401546 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=bA470J20.2 | |gene_alias=bA470J20.2 | ||
|gene_description=chromosome 9 open reading frame 152 | |gene_description=chromosome 9 open reading frame 152 | ||
| − | |gene_name=C9orf152 | + | |gene_id=401546 |
| + | |gene_name=chromosome 9 open reading frame 152 | ||
| + | |gene_source=HGNC:31455 | ||
| + | |gene_symbol=C9orf152 | ||
| + | |gene_synonyms=bA470J20.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31455 | ||
|nearest_ensembl=ENSG00000188959 | |nearest_ensembl=ENSG00000188959 | ||
|nearest_promoter_id=NM_001012993 | |nearest_promoter_id=NM_001012993 | ||
|nearest_refseq=NM_001012993 | |nearest_refseq=NM_001012993 | ||
|nearest_unigene=Hs.125608 | |nearest_unigene=Hs.125608 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=110208156 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000400613.4 uc011lwk.3 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101918.1 | |tss_id=hg_101918.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5JTZ5 | ||
}} | }} | ||
Revision as of 19:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000400613.4 uc011lwk.3 |
|---|---|
| Distance: | -11 |
| Num_trans: | 3 |
| All_trans: | ENST00000400613.4:-11 uc011lwk.3:-11 NM_001012993:24 |
TATA-Box annotation
| Distance to TSS: | -34 |
|---|---|
| Nearest PromoterID: | NM_001012993 |
| Entrez ID: | 401546 |
| Nearest Unigene: | Hs.125608 |
| Nearest Refseq: | NM_001012993 |
| Nearest Ensembl: | ENSG00000188959 |
| Gene Name: | chromosome 9 open reading frame 152 |
| Gene Alias: | bA470J20.2 |
| Gene Description: | chromosome 9 open reading frame 152 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
