Difference between revisions of "TSS:Hg 102035.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=69 |entrez_id=158401 |gc_percent=0.616915 |gene_alias=- |gene_description=chromosome 9 open reading frame 84 |gene_name=C9orf84...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC144680:0 AK057341:0 BC112357:0 ENST00000374283.5:-58 NR_109816:-58 uc004bfs.2:-58 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=0 | ||
|distance_to_tss=69 | |distance_to_tss=69 | ||
| + | |end=111794950 | ||
|entrez_id=158401 | |entrez_id=158401 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 84 | |gene_description=chromosome 9 open reading frame 84 | ||
| − | |gene_name=C9orf84 | + | |gene_id=158401 |
| + | |gene_name=chromosome 9 open reading frame 84 | ||
| + | |gene_source=HGNC:26535 | ||
| + | |gene_symbol=C9orf84 | ||
| + | |gene_synonyms=FLJ32779 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26535 | ||
|nearest_ensembl=ENSG00000165181 | |nearest_ensembl=ENSG00000165181 | ||
|nearest_promoter_id=NR_109816 | |nearest_promoter_id=NR_109816 | ||
|nearest_refseq=NM_173521 | |nearest_refseq=NM_173521 | ||
|nearest_unigene=Hs.428209 | |nearest_unigene=Hs.428209 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=111794927 | ||
| + | |strand=- | ||
| + | |transcript_name=BC144680 AK057341 BC112357 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102035.1 | |tss_id=hg_102035.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC144680 AK057341 BC112357 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | BC144680:0 AK057341:0 BC112357:0 ENST00000374283.5:-58 NR_109816:-58 uc004bfs.2:-58 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NR_109816 |
| Entrez ID: | 158401 |
| Nearest Unigene: | Hs.428209 |
| Nearest Refseq: | NM_173521 |
| Nearest Ensembl: | ENSG00000165181 |
| Gene Name: | chromosome 9 open reading frame 84 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 84 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
