Difference between revisions of "TSS:Hg 102106.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=55 |entrez_id=210 |gc_percent=0.716418 |gene_alias=ALADH|PBGS |gene_description=aminolevulinate dehydratase |gene_name=ALAD |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PBGS= | ||
| + | |all_trans=ENST00000468504.5:0 ENST00000464749.5:0 ENST00000448137.5:0 ENST00000494848.1:0 uc064vea.1:0 uc064veb.1:0 uc064vec.1:0 uc064vef.1:0 BC000977:0 AK131490:0 AK290490:0 AK312552:0 ENST00000482847.5:7 uc064vdz.1:7 ENST00000409155.7:-17 uc011lxf.3:-17 NM_000031:-22 NM_001003945:-22 NM_001317745:130 AK295945:130 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
| + | |end=113401316 | ||
|entrez_id=210 | |entrez_id=210 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=ALADH|PBGS | |gene_alias=ALADH|PBGS | ||
|gene_description=aminolevulinate dehydratase | |gene_description=aminolevulinate dehydratase | ||
| − | |gene_name=ALAD | + | |gene_id=210 |
| + | |gene_name=aminolevulinate dehydratase | ||
| + | |gene_source=HGNC:395 | ||
| + | |gene_symbol=ALAD | ||
| + | |gene_synonyms=ALADH PBGS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:395 | ||
|nearest_ensembl=ENSG00000148218 | |nearest_ensembl=ENSG00000148218 | ||
|nearest_promoter_id=NM_001003945 | |nearest_promoter_id=NM_001003945 | ||
|nearest_refseq=NM_000031 | |nearest_refseq=NM_000031 | ||
|nearest_unigene=Hs.1227 | |nearest_unigene=Hs.1227 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=113401249 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000468504.5 ENST00000464749.5 ENST00000448137.5 ENST00000494848.1 uc064vea.1 uc064veb.1 uc064vec.1 uc064vef.1 BC000977 AK131490 AK290490 AK312552 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102106.1 | |tss_id=hg_102106.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7ZBK6 Q6ZMU0 | ||
}} | }} | ||
Revision as of 19:12, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000468504.5 ENST00000464749.5 ENST00000448137.5 ENST00000494848.1 uc064vea.1 uc064veb.1 uc064vec.1 uc064vef.1 BC000977 AK131490 AK290490 AK312552 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000468504.5:0 ENST00000464749.5:0 ENST00000448137.5:0 ENST00000494848.1:0 uc064vea.1:0 uc064veb.1:0 uc064vec.1:0 uc064vef.1:0 BC000977:0 AK131490:0 AK290490:0 AK312552:0 ENST00000482847.5:7 uc064vdz.1:7 ENST00000409155.7:-17 uc011lxf.3:-17 NM_000031:-22 NM_001003945:-22 NM_001317745:130 AK295945:130 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_001003945 |
| Entrez ID: | 210 |
| Nearest Unigene: | Hs.1227 |
| Nearest Refseq: | NM_000031 |
| Nearest Ensembl: | ENSG00000148218 |
| Gene Name: | aminolevulinate dehydratase |
| Gene Alias: | ALADH |
| Gene Description: | aminolevulinate dehydratase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
