Difference between revisions of "TSS:Hg 102178.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=38 |entrez_id=9966 |gc_percent=0.572139 |gene_alias=TL1|TL1A|TNLG1B|VEGI|VEGI192A |gene_description=tumor necrosis factor superf...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TL1A= | ||
| + | |TNLG1B= | ||
| + | |VEGI= | ||
| + | |VEGI192A= | ||
| + | |all_trans=BC069435:3 AK313721:-9 ENST00000374045.4:-32 uc004bjh.4:-32 BC104462:-33 NM_005118:-34 BC104463:-34 BC074940:34 BC074941:34 AF520785:-38 AK291642:47 AB590753:73 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=3 | ||
|distance_to_tss=38 | |distance_to_tss=38 | ||
| + | |end=114806094 | ||
|entrez_id=9966 | |entrez_id=9966 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=TL1|TL1A|TNLG1B|VEGI|VEGI192A | |gene_alias=TL1|TL1A|TNLG1B|VEGI|VEGI192A | ||
|gene_description=tumor necrosis factor superfamily member 15 | |gene_description=tumor necrosis factor superfamily member 15 | ||
| − | |gene_name=TNFSF15 | + | |gene_id=9966 |
| + | |gene_name=tumor necrosis factor superfamily member 15 | ||
| + | |gene_source=HGNC:11931 | ||
| + | |gene_symbol=TNFSF15 | ||
| + | |gene_synonyms=MGC129934 MGC129935 TL1 TL1A VEGI VEGI192A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11931 | ||
|nearest_ensembl=ENSG00000181634 | |nearest_ensembl=ENSG00000181634 | ||
|nearest_promoter_id=NM_005118 | |nearest_promoter_id=NM_005118 | ||
|nearest_refseq=NM_005118 | |nearest_refseq=NM_005118 | ||
|nearest_unigene=Hs.23349 | |nearest_unigene=Hs.23349 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=114806085 | ||
| + | |strand=- | ||
| + | |transcript_name=BC069435 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102178.1 | |tss_id=hg_102178.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:15, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC069435 |
|---|---|
| Distance: | 3 |
| Num_trans: | 12 |
| All_trans: | BC069435:3 AK313721:-9 ENST00000374045.4:-32 uc004bjh.4:-32 BC104462:-33 NM_005118:-34 BC104463:-34 BC074940:34 BC074941:34 AF520785:-38 AK291642:47 AB590753:73 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_005118 |
| Entrez ID: | 9966 |
| Nearest Unigene: | Hs.23349 |
| Nearest Refseq: | NM_005118 |
| Nearest Ensembl: | ENSG00000181634 |
| Gene Name: | tumor necrosis factor superfamily member 15 |
| Gene Alias: | TL1 |
| Gene Description: | tumor necrosis factor superfamily member 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
