Difference between revisions of "TSS:Hg 102256.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=70 |entrez_id=23245 |gc_percent=0.791045 |gene_alias=bA67K19.1 |gene_description=astrotactin 2 |gene_name=ASTN2 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB383928:26 ENST00000313400.8:-66 ENST00000361477.7:-66 NM_014010:-66 uc022bmm.2:-66 uc064vhm.1:-66 AB014534:-66 BC146756:-66 BX649176:-80 ENST00000361209.6:-97 uc004bjt.3:-97 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=26 | ||
|distance_to_tss=70 | |distance_to_tss=70 | ||
| + | |end=117414973 | ||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=bA67K19.1 | |gene_alias=bA67K19.1 | ||
|gene_description=astrotactin 2 | |gene_description=astrotactin 2 | ||
| − | |gene_name=ASTN2 | + | |gene_id=23245 |
| + | |gene_name=astrotactin 2 | ||
| + | |gene_source=HGNC:17021 | ||
| + | |gene_symbol=ASTN2 | ||
| + | |gene_synonyms=KIAA0634 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17021 | ||
|nearest_ensembl=ENSG00000148219 | |nearest_ensembl=ENSG00000148219 | ||
|nearest_promoter_id=NM_014010 | |nearest_promoter_id=NM_014010 | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=117414965 | ||
| + | |strand=- | ||
| + | |transcript_name=AB383928 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102256.1 | |tss_id=hg_102256.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB383928 |
|---|---|
| Distance: | 26 |
| Num_trans: | 11 |
| All_trans: | AB383928:26 ENST00000313400.8:-66 ENST00000361477.7:-66 NM_014010:-66 uc022bmm.2:-66 uc064vhm.1:-66 AB014534:-66 BC146756:-66 BX649176:-80 ENST00000361209.6:-97 uc004bjt.3:-97 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_014010 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
