Difference between revisions of "TSS:Hg 102258.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-35 |entrez_id=23245 |gc_percent=0.771144 |gene_alias=bA67K19.1 |gene_description=astrotactin 2 |gene_name=ASTN2 |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000361209.6:0 uc004bjt.3:0 BX649176:12 ENST00000313400.8:26 ENST00000361477.7:26 NM_014010:26 uc022bmm.2:26 uc064vhm.1:26 AB014534:26 BC146756:26 AB383928:125 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| + | |end=117415083 | ||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=bA67K19.1 | |gene_alias=bA67K19.1 | ||
|gene_description=astrotactin 2 | |gene_description=astrotactin 2 | ||
| − | |gene_name=ASTN2 | + | |gene_id=23245 |
| + | |gene_name=astrotactin 2 | ||
| + | |gene_source=HGNC:17021 | ||
| + | |gene_symbol=ASTN2 | ||
| + | |gene_synonyms=KIAA0634 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17021 | ||
|nearest_ensembl=ENSG00000148219 | |nearest_ensembl=ENSG00000148219 | ||
|nearest_promoter_id=NM_014010 | |nearest_promoter_id=NM_014010 | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=117415064 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000361209.6 uc004bjt.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102258.1 | |tss_id=hg_102258.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75129 | ||
}} | }} | ||
Revision as of 19:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361209.6 uc004bjt.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000361209.6:0 uc004bjt.3:0 BX649176:12 ENST00000313400.8:26 ENST00000361477.7:26 NM_014010:26 uc022bmm.2:26 uc064vhm.1:26 AB014534:26 BC146756:26 AB383928:125 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_014010 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
