Difference between revisions of "TSS:Hg 102307.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=88 |entrez_id=5711 |gc_percent=0.671642 |gene_alias=S5B |gene_description="proteasome 26S subunit, non-ATPase 5" |gene_name=PSMD...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000373904.5:0 ENST00000476949.1:0 ENST00000625444.1:0 uc011lye.4:0 uc064vjf.1:0 uc064vjh.1:0 BC014478:0 D31889:0 S79862:0 AK291051:0 AK303007:0 KJ891927:0 DQ892085:0 DQ895279:0 AB464080:0 CU677015:0 ENST00000210313.7:-17 uc004bko.5:-17 ENST00000471789.1:18 uc064vjg.1:18 NM_001270427:-54 NM_005047:-54 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=88 | |distance_to_tss=88 | ||
| + | |end=120842967 | ||
|entrez_id=5711 | |entrez_id=5711 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=S5B | |gene_alias=S5B | ||
|gene_description="proteasome 26S subunit, non-ATPase 5" | |gene_description="proteasome 26S subunit, non-ATPase 5" | ||
| − | |gene_name=PSMD5 | + | |gene_id=5711 |
| + | |gene_name="proteasome 26S subunit, non-ATPase 5" | ||
| + | |gene_source=HGNC:9563 | ||
| + | |gene_symbol=PSMD5 | ||
| + | |gene_synonyms=KIAA0072 S5B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9563 | ||
|nearest_ensembl=ENSG00000095261 | |nearest_ensembl=ENSG00000095261 | ||
|nearest_promoter_id=NM_001270427 | |nearest_promoter_id=NM_001270427 | ||
|nearest_refseq=NM_005047 | |nearest_refseq=NM_005047 | ||
|nearest_unigene=Hs.193725 | |nearest_unigene=Hs.193725 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=120842899 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000373904.5 ENST00000476949.1 ENST00000625444.1 uc011lye.4 uc064vjf.1 uc064vjh.1 BC014478 D31889 S79862 AK291051 AK303007 KJ891927 DQ892085 DQ895279 AB464080 CU677015 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102307.1 | |tss_id=hg_102307.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A8K4T6 F2Z3J2 Q16401 | ||
}} | }} | ||
Revision as of 19:20, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373904.5 ENST00000476949.1 ENST00000625444.1 uc011lye.4 uc064vjf.1 uc064vjh.1 BC014478 D31889 S79862 AK291051 AK303007 KJ891927 DQ892085 DQ895279 AB464080 CU677015 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000373904.5:0 ENST00000476949.1:0 ENST00000625444.1:0 uc011lye.4:0 uc064vjf.1:0 uc064vjh.1:0 BC014478:0 D31889:0 S79862:0 AK291051:0 AK303007:0 KJ891927:0 DQ892085:0 DQ895279:0 AB464080:0 CU677015:0 ENST00000210313.7:-17 uc004bko.5:-17 ENST00000471789.1:18 uc064vjg.1:18 NM_001270427:-54 NM_005047:-54 |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_001270427 |
| Entrez ID: | 5711 |
| Nearest Unigene: | Hs.193725 |
| Nearest Refseq: | NM_005047 |
| Nearest Ensembl: | ENSG00000095261 |
| Gene Name: | "proteasome 26S subunit, non-ATPase 5" |
| Gene Alias: | S5B |
| Gene Description: | "proteasome 26S subunit, non-ATPase 5" |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
