Difference between revisions of "TSS:Hg 102454.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=538 |entrez_id=11224 |gc_percent=0.606965 |gene_alias=L35 |gene_description=ribosomal protein L35 |gene_name=RPL35 |gene_type=pr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC094828:-127 CU674168:-127 KJ893256:-127 KJ898381:-127 DQ891363:-127 DQ894543:-127 CR456877:-127 ENST00000373570.8:-486 uc064vqk.1:-486 BC071915:-498 U12465:-499 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=-127 | ||
|distance_to_tss=538 | |distance_to_tss=538 | ||
| + | |end=124861429 | ||
|entrez_id=11224 | |entrez_id=11224 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=L35 | |gene_alias=L35 | ||
|gene_description=ribosomal protein L35 | |gene_description=ribosomal protein L35 | ||
| − | |gene_name=RPL35 | + | |gene_id=11224 |
| + | |gene_name=ribosomal protein L35 | ||
| + | |gene_source=HGNC:10344 | ||
| + | |gene_symbol=RPL35 | ||
| + | |gene_synonyms=L35 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10344 | ||
|nearest_ensembl=ENSG00000136942 | |nearest_ensembl=ENSG00000136942 | ||
|nearest_promoter_id=NM_007209 | |nearest_promoter_id=NM_007209 | ||
|nearest_refseq=NM_007209 | |nearest_refseq=NM_007209 | ||
|nearest_unigene=Hs.182825 | |nearest_unigene=Hs.182825 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=124861417 | ||
| + | |strand=- | ||
| + | |transcript_name=BC094828 CU674168 KJ893256 KJ898381 DQ891363 DQ894543 CR456877 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102454.1 | |tss_id=hg_102454.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC094828 CU674168 KJ893256 KJ898381 DQ891363 DQ894543 CR456877 |
|---|---|
| Distance: | -127 |
| Num_trans: | 11 |
| All_trans: | BC094828:-127 CU674168:-127 KJ893256:-127 KJ898381:-127 DQ891363:-127 DQ894543:-127 CR456877:-127 ENST00000373570.8:-486 uc064vqk.1:-486 BC071915:-498 U12465:-499 |
TATA-Box annotation
| Distance to TSS: | 538 |
|---|---|
| Nearest PromoterID: | NM_007209 |
| Entrez ID: | 11224 |
| Nearest Unigene: | Hs.182825 |
| Nearest Refseq: | NM_007209 |
| Nearest Ensembl: | ENSG00000136942 |
| Gene Name: | ribosomal protein L35 |
| Gene Alias: | L35 |
| Gene Description: | ribosomal protein L35 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
