Difference between revisions of "TSS:Hg 102468.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=211 |entrez_id=5537 |gc_percent=0.631841 |gene_alias=PP6|PP6C |gene_description=protein phosphatase 6 catalytic subunit |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PP6C= | ||
| + | |all_trans=AF035158:4 X92972:-4 KJ891876:4 BT019708:4 AB385530:4 KU178271:4 KU178272:4 AK295752:-24 AK312332:-36 ENST00000456642.1:-48 uc064vrc.1:-48 BC006990:-51 AK316527:-57 AK299087:-68 AK295190:-68 ENST00000373547.8:-83 uc004bpg.5:-83 ENST00000451402.5:-204 ENST00000415905.5:-204 NM_001123355:-204 NM_001123369:-204 NM_002721:-204 uc010mww.4:-204 uc010mwv.4:-204 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=4 | ||
|distance_to_tss=211 | |distance_to_tss=211 | ||
| + | |end=125189735 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=PP6|PP6C | |gene_alias=PP6|PP6C | ||
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
| − | |gene_name=PPP6C | + | |gene_id=5537 |
| + | |gene_name=protein phosphatase 6 catalytic subunit | ||
| + | |gene_source=HGNC:9323 | ||
| + | |gene_symbol=PPP6C | ||
| + | |gene_synonyms=PP6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9323 | ||
|nearest_ensembl=ENSG00000119414 | |nearest_ensembl=ENSG00000119414 | ||
|nearest_promoter_id=NM_002721 | |nearest_promoter_id=NM_002721 | ||
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=125189721 | ||
| + | |strand=- | ||
| + | |transcript_name=AF035158 KJ891876 BT019708 AB385530 KU178271 KU178272 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102468.1 | |tss_id=hg_102468.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A0S2Z482 | ||
}} | }} | ||
Revision as of 19:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF035158 KJ891876 BT019708 AB385530 KU178271 KU178272 |
|---|---|
| Distance: | 4 |
| Num_trans: | 24 |
| All_trans: | AF035158:4 X92972:-4 KJ891876:4 BT019708:4 AB385530:4 KU178271:4 KU178272:4 AK295752:-24 AK312332:-36 ENST00000456642.1:-48 uc064vrc.1:-48 BC006990:-51 AK316527:-57 AK299087:-68 AK295190:-68 ENST00000373547.8:-83 uc004bpg.5:-83 ENST00000451402.5:-204 ENST00000415905.5:-204 NM_001123355:-204 NM_001123369:-204 NM_002721:-204 uc010mww.4:-204 uc010mwv.4:-204 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6 |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
