Difference between revisions of "TSS:Hg 102503.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=56876 |entrez_id=79109 |gc_percent=0.452736 |gene_alias=JC310|MIP1|SIN1|SIN1b|SIN1g |gene_description=mitogen-activated protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MIP1= | ||
| + | |SIN1= | ||
| + | |SIN1b= | ||
| + | |SIN1g= | ||
| + | |all_trans=ENST00000420643.5:-51 uc064vsc.1:-51 AK316149:-72 ENST00000473837.5:-95 uc010mxb.2:-95 AK309507:-95 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-51 | ||
|distance_to_tss=56876 | |distance_to_tss=56876 | ||
| + | |end=125650366 | ||
|entrez_id=79109 | |entrez_id=79109 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=JC310|MIP1|SIN1|SIN1b|SIN1g | |gene_alias=JC310|MIP1|SIN1|SIN1b|SIN1g | ||
|gene_description=mitogen-activated protein kinase associated protein 1 | |gene_description=mitogen-activated protein kinase associated protein 1 | ||
| − | |gene_name=MAPKAP1 | + | |gene_id=79109 |
| + | |gene_name=mitogen-activated protein kinase associated protein 1 | ||
| + | |gene_source=HGNC:18752 | ||
| + | |gene_symbol=MAPKAP1 | ||
| + | |gene_synonyms=MGC2745 MIP1 SIN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18752 | ||
|nearest_ensembl=ENSG00000119487 | |nearest_ensembl=ENSG00000119487 | ||
|nearest_promoter_id=NM_001006617 | |nearest_promoter_id=NM_001006617 | ||
|nearest_refseq=NM_024117 | |nearest_refseq=NM_024117 | ||
|nearest_unigene=Hs.495138 | |nearest_unigene=Hs.495138 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=125650349 | ||
| + | |strand=- | ||
|tata_box="51(GGATTTAAATGG,-,0.00)" | |tata_box="51(GGATTTAAATGG,-,0.00)" | ||
| + | |transcript_name=ENST00000420643.5 uc064vsc.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102503.1 | |tss_id=hg_102503.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1AMA5 | ||
}} | }} | ||
Revision as of 19:29, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000420643.5 uc064vsc.1 |
|---|---|
| Distance: | -51 |
| Num_trans: | 6 |
| All_trans: | ENST00000420643.5:-51 uc064vsc.1:-51 AK316149:-72 ENST00000473837.5:-95 uc010mxb.2:-95 AK309507:-95 |
TATA-Box annotation
| Distance to TSS: | 56876 |
|---|---|
| Nearest PromoterID: | NM_001006617 |
| Entrez ID: | 79109 |
| Nearest Unigene: | Hs.495138 |
| Nearest Refseq: | NM_024117 |
| Nearest Ensembl: | ENSG00000119487 |
| Gene Name: | mitogen-activated protein kinase associated protein 1 |
| Gene Alias: | JC310 |
| Gene Description: | mitogen-activated protein kinase associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "51(GGATTTAAATGG,-,0.00)" |
