Difference between revisions of "TSS:Hg 102811.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-162 |entrez_id=84929 |gc_percent=0.776119 |gene_alias=- |gene_description=fibrinogen C domain containing 1 |gene_name=FIBCD1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000463475.1:-32 uc064woi.1:-32 ENST00000451466.1:66 uc064wof.1:66 ENST00000486250.5:67 uc064woh.1:67 ENST00000448616.5:138 NM_001145106:138 uc011mcc.2:138 AK300287:170 NM_032843:354 ENST00000372338.8:356 uc004bzz.4:356 BC032953:356 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=-32 | ||
|distance_to_tss=-162 | |distance_to_tss=-162 | ||
| + | |end=130939254 | ||
|entrez_id=84929 | |entrez_id=84929 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=fibrinogen C domain containing 1 | |gene_description=fibrinogen C domain containing 1 | ||
| − | |gene_name=FIBCD1 | + | |gene_id=84929 |
| + | |gene_name=fibrinogen C domain containing 1 | ||
| + | |gene_source=HGNC:25922 | ||
| + | |gene_symbol=FIBCD1 | ||
| + | |gene_synonyms=FLJ14810 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25922 | ||
|nearest_ensembl=ENSG00000130720 | |nearest_ensembl=ENSG00000130720 | ||
|nearest_promoter_id=NM_001145106 | |nearest_promoter_id=NM_001145106 | ||
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=130939205 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000463475.1 uc064woi.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102811.1 | |tss_id=hg_102811.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000463475.1 uc064woi.1 |
|---|---|
| Distance: | -32 |
| Num_trans: | 14 |
| All_trans: | ENST00000463475.1:-32 uc064woi.1:-32 ENST00000451466.1:66 uc064wof.1:66 ENST00000486250.5:67 uc064woh.1:67 ENST00000448616.5:138 NM_001145106:138 uc011mcc.2:138 AK300287:170 NM_032843:354 ENST00000372338.8:356 uc004bzz.4:356 BC032953:356 |
TATA-Box annotation
| Distance to TSS: | -162 |
|---|---|
| Nearest PromoterID: | NM_001145106 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | fibrinogen C domain containing 1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
