Difference between revisions of "TSS:Hg 102943.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=47 |entrez_id=5900 |gc_percent=0.825871 |gene_alias=RGDS|RGF|RalGEF |gene_description=ral guanine nucleotide dissociation stimu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RGF= | ||
| + | |RalGEF= | ||
| + | |all_trans=ENST00000372050.7:23 ENST00000372047.7:23 uc004ccq.5:23 uc004cco.5:23 BC059362:-31 AF295773:34 NM_006266:-42 NM_001271776:-42 ENST00000493438.5:43 uc004ccp.5:43 AK074114:43 GQ129266:43 GQ129265:43 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=23 | ||
|distance_to_tss=47 | |distance_to_tss=47 | ||
| + | |end=133121208 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
|gene_alias=RGDS|RGF|RalGEF | |gene_alias=RGDS|RGF|RalGEF | ||
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
| − | |gene_name=RALGDS | + | |gene_id=5900 |
| + | |gene_name=ral guanine nucleotide dissociation stimulator | ||
| + | |gene_source=HGNC:9842 | ||
| + | |gene_symbol=RALGDS | ||
| + | |gene_synonyms=RGDS RGF RalGEF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9842 | ||
|nearest_ensembl=ENSG00000160271 | |nearest_ensembl=ENSG00000160271 | ||
|nearest_promoter_id=NM_006266 | |nearest_promoter_id=NM_006266 | ||
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=133121198 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372050.7 ENST00000372047.7 uc004ccq.5 uc004cco.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102943.1 | |tss_id=hg_102943.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q12967 | ||
}} | }} | ||
Revision as of 19:48, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372050.7 ENST00000372047.7 uc004ccq.5 uc004cco.5 |
|---|---|
| Distance: | 23 |
| Num_trans: | 13 |
| All_trans: | ENST00000372050.7:23 ENST00000372047.7:23 uc004ccq.5:23 uc004cco.5:23 BC059362:-31 AF295773:34 NM_006266:-42 NM_001271776:-42 ENST00000493438.5:43 uc004ccp.5:43 AK074114:43 GQ129266:43 GQ129265:43 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_006266 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
