Difference between revisions of "TSS:Hg 10297.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=-14 |entrez_id=93611 |gc_percent=0.756219 |gene_alias=FBG3|FBX30|FBX6A|Fbx44|Fbxo6a |gene_description=F-box protein 44 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FBX30= | ||
| + | |FBX6A= | ||
| + | |Fbx44= | ||
| + | |Fbxo6a= | ||
| + | |all_trans=AK308531:6 DQ892848:8 DQ892849:8 DQ896095:8 CR542110:10 KJ898609:10 CU692940:10 AB463629:10 BC025233:-43 BC096747:-59 AK313019:-59 BC014957:-77 ENST00000466919.1:153 uc057cgi.1:153 ENST00000354287.4:-310 uc001asj.4:-310 AF187318:-310 NM_012168:-459 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=6 | ||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
| + | |end=11654372 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=FBG3|FBX30|FBX6A|Fbx44|Fbxo6a | |gene_alias=FBG3|FBX30|FBX6A|Fbx44|Fbxo6a | ||
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
| − | |gene_name= | + | |gene_id=26232 |
| + | |gene_name=F-box protein 2 | ||
| + | |gene_source=HGNC:13581 | ||
| + | |gene_symbol=FBXO2 | ||
| + | |gene_synonyms=FBX2 Fbg1 Fbs1 Nfb42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13581 | ||
|nearest_ensembl=ENSG00000132879 | |nearest_ensembl=ENSG00000132879 | ||
|nearest_promoter_id=NM_183412 | |nearest_promoter_id=NM_183412 | ||
|nearest_refseq=NM_033182 | |nearest_refseq=NM_033182 | ||
|nearest_unigene=Hs.556006 | |nearest_unigene=Hs.556006 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=11654349 | ||
| + | |strand=- | ||
|tata_box="-100(CCTTTAAGAGGC,+,0.00)" | |tata_box="-100(CCTTTAAGAGGC,+,0.00)" | ||
| + | |transcript_name=AK308531 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10297.1 | |tss_id=hg_10297.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:49, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK308531 |
|---|---|
| Distance: | 6 |
| Num_trans: | 18 |
| All_trans: | AK308531:6 DQ892848:8 DQ892849:8 DQ896095:8 CR542110:10 KJ898609:10 CU692940:10 AB463629:10 BC025233:-43 BC096747:-59 AK313019:-59 BC014957:-77 ENST00000466919.1:153 uc057cgi.1:153 ENST00000354287.4:-310 uc001asj.4:-310 AF187318:-310 NM_012168:-459 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_183412 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG3 |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(CCTTTAAGAGGC,+,0.00)" |
