Difference between revisions of "TSS:Hg 102975.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=19671 |entrez_id=28 |gc_percent=0.552239 |gene_alias=A3GALNT|A3GALT1|GTB|NAGAT |gene_description="ABO, alpha 1-3-N-acetylgalacto...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |A3GALT1= | ||
| + | |GTB= | ||
| + | |NAGAT= | ||
| + | |all_trans=AK124587:34 U15197:-118 S44054:-129 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=34 | ||
|distance_to_tss=19671 | |distance_to_tss=19671 | ||
| + | |end=133255563 | ||
|entrez_id=28 | |entrez_id=28 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_020469 | |nearest_refseq=NM_020469 | ||
|nearest_unigene=Hs.654423 | |nearest_unigene=Hs.654423 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=133255522 | ||
| + | |strand=- | ||
| + | |transcript_name=AK124587 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102975.1 | |tss_id=hg_102975.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:49, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK124587 |
|---|---|
| Distance: | 34 |
| Num_trans: | 3 |
| All_trans: | AK124587:34 U15197:-118 S44054:-129 |
TATA-Box annotation
| Distance to TSS: | 19671 |
|---|---|
| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | ABO |
| Gene Alias: | A3GALNT |
| Gene Description: | "ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase" |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
