Difference between revisions of "TSS:Hg 1030.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=69 |entrez_id=127707 |gc_percent=0.567164 |gene_alias=- |gene_description=kelch domain containing 7A |gene_name=KLHDC7A |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000400664.2:-14 uc001bax.4:-14 NM_152375:-66 BC151205:169 AK096072:370 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-14 | ||
|distance_to_tss=69 | |distance_to_tss=69 | ||
| + | |end=18481002 | ||
|entrez_id=127707 | |entrez_id=127707 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=kelch domain containing 7A | |gene_description=kelch domain containing 7A | ||
| − | |gene_name=KLHDC7A | + | |gene_id=127707 |
| + | |gene_name=kelch domain containing 7A | ||
| + | |gene_source=HGNC:26791 | ||
| + | |gene_symbol=KLHDC7A | ||
| + | |gene_synonyms=FLJ38753 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26791 | ||
|nearest_ensembl=ENSG00000179023 | |nearest_ensembl=ENSG00000179023 | ||
|nearest_promoter_id=NM_152375 | |nearest_promoter_id=NM_152375 | ||
|nearest_refseq=NM_152375 | |nearest_refseq=NM_152375 | ||
|nearest_unigene=Hs.406913 | |nearest_unigene=Hs.406913 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=18480995 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000400664.2 uc001bax.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1030.1 | |tss_id=hg_1030.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VTJ3 | ||
}} | }} | ||
Revision as of 19:50, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000400664.2 uc001bax.4 |
|---|---|
| Distance: | -14 |
| Num_trans: | 5 |
| All_trans: | ENST00000400664.2:-14 uc001bax.4:-14 NM_152375:-66 BC151205:169 AK096072:370 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_152375 |
| Entrez ID: | 127707 |
| Nearest Unigene: | Hs.406913 |
| Nearest Refseq: | NM_152375 |
| Nearest Ensembl: | ENSG00000179023 |
| Gene Name: | kelch domain containing 7A |
| Gene Alias: | - |
| Gene Description: | kelch domain containing 7A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
