Difference between revisions of "TSS:Hg 103048.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-147 |entrez_id=100130548 |gc_percent=0.656716 |gene_alias=- |gene_description=uncharacterized LOC100130548 |gene_name=LOC10013...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000433041.1:0 uc064wwu.1:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=-147 | |distance_to_tss=-147 | ||
| + | |end=134054151 | ||
|entrez_id=100130548 | |entrez_id=100130548 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100130548 | |gene_description=uncharacterized LOC100130548 | ||
| − | |gene_name= | + | |gene_id=8019 |
| + | |gene_name=bromodomain containing 3 | ||
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000235138 | |nearest_ensembl=ENSG00000235138 | ||
|nearest_promoter_id=NR_135126 | |nearest_promoter_id=NR_135126 | ||
|nearest_refseq=NR_135126 | |nearest_refseq=NR_135126 | ||
|nearest_unigene=Hs.671096 | |nearest_unigene=Hs.671096 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=134054134 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000433041.1 uc064wwu.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103048.1 | |tss_id=hg_103048.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A9J575 | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000433041.1 uc064wwu.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000433041.1:0 uc064wwu.1:0 |
TATA-Box annotation
| Distance to TSS: | -147 |
|---|---|
| Nearest PromoterID: | NR_135126 |
| Entrez ID: | 100130548 |
| Nearest Unigene: | Hs.671096 |
| Nearest Refseq: | NR_135126 |
| Nearest Ensembl: | ENSG00000235138 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130548 |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
