Difference between revisions of "TSS:Hg 103120.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=2 |entrez_id=138151 |gc_percent=0.81592 |gene_alias=BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB |gene_description=NACC family member...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BTBD14= | ||
| + | |BTBD14A= | ||
| + | |BTBD31= | ||
| + | |NAC-2= | ||
| + | |RBB= | ||
| + | |all_trans=ENST00000277554.3:0 NM_144653:0 uc004cgv.4:0 AK129748:0 BC015649:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=136095296 | ||
|entrez_id=138151 | |entrez_id=138151 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB | |gene_alias=BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB | ||
|gene_description=NACC family member 2 | |gene_description=NACC family member 2 | ||
| − | |gene_name=NACC2 | + | |gene_id=138151 |
| + | |gene_name=NACC family member 2 | ||
| + | |gene_source=HGNC:23846 | ||
| + | |gene_symbol=NACC2 | ||
| + | |gene_synonyms=BEND9 BTBD31 MGC23427 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23846 | ||
|nearest_ensembl=ENSG00000148411 | |nearest_ensembl=ENSG00000148411 | ||
|nearest_promoter_id=NM_144653 | |nearest_promoter_id=NM_144653 | ||
|nearest_refseq=NM_144653 | |nearest_refseq=NM_144653 | ||
|nearest_unigene=Hs.112895 | |nearest_unigene=Hs.112895 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=136095269 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000277554.3 NM_144653 uc004cgv.4 AK129748 BC015649 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103120.1 | |tss_id=hg_103120.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R8I0 Q96BF6 | ||
}} | }} | ||
Revision as of 19:55, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000277554.3 NM_144653 uc004cgv.4 AK129748 BC015649 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000277554.3:0 NM_144653:0 uc004cgv.4:0 AK129748:0 BC015649:0 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_144653 |
| Entrez ID: | 138151 |
| Nearest Unigene: | Hs.112895 |
| Nearest Refseq: | NM_144653 |
| Nearest Ensembl: | ENSG00000148411 |
| Gene Name: | NACC family member 2 |
| Gene Alias: | BEND9 |
| Gene Description: | NACC family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
