Difference between revisions of "TSS:Hg 103128.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=-1 |entrez_id=90120 |gc_percent=0.756219 |gene_alias=- |gene_description=chromosome 9 open reading frame 69 |gene_name=C9orf69...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000418388.5:0 NM_152833:0 NR_134506:0 uc004cgx.6:0 BC021231:0 AK091349:7 AK023162:12 BC013282:27 BC014304:69 BC111053:261 ENST00000557985.2:317 uc064xav.1:317 BC092490:317 ENST00000448040.2:413 uc064xax.1:413 ENST00000561457.2:420 NM_001256526:420 uc031tfs.1:420 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=0 | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
| + | |end=136118918 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 69 | |gene_description=chromosome 9 open reading frame 69 | ||
| − | |gene_name=C9orf69 | + | |gene_id=90120 |
| + | |gene_name=chromosome 9 open reading frame 69 | ||
| + | |gene_source=HGNC:31009 | ||
| + | |gene_symbol=C9orf69 | ||
| + | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31009 | ||
|nearest_ensembl=ENSG00000238227 | |nearest_ensembl=ENSG00000238227 | ||
|nearest_promoter_id=NR_134506 | |nearest_promoter_id=NR_134506 | ||
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=136118850 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000418388.5 NM_152833 NR_134506 uc004cgx.6 BC021231 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103128.1 | |tss_id=hg_103128.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H0YL14 | ||
}} | }} | ||
Revision as of 19:56, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000418388.5 NM_152833 NR_134506 uc004cgx.6 BC021231 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000418388.5:0 NM_152833:0 NR_134506:0 uc004cgx.6:0 BC021231:0 AK091349:7 AK023162:12 BC013282:27 BC014304:69 BC111053:261 ENST00000557985.2:317 uc064xav.1:317 BC092490:317 ENST00000448040.2:413 uc064xax.1:413 ENST00000561457.2:420 NM_001256526:420 uc031tfs.1:420 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_134506 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | chromosome 9 open reading frame 69 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 69 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
