Difference between revisions of "TSS:Hg 103167.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=-25 |entrez_id=9919 |gc_percent=0.751244 |gene_alias=KIAA0310|SEC16L|p250 |gene_description="SEC16 homolog A, endoplasmic reticu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SEC16L= | ||
| + | |all_trans=ENST00000290037.10:0 NM_001276418:0 uc010nbn.4:0 AB593115:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
| + | |end=136483815 | ||
|entrez_id=9919 | |entrez_id=9919 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=KIAA0310|SEC16L|p250 | |gene_alias=KIAA0310|SEC16L|p250 | ||
|gene_description="SEC16 homolog A, endoplasmic reticulum export factor" | |gene_description="SEC16 homolog A, endoplasmic reticulum export factor" | ||
| − | |gene_name=SEC16A | + | |gene_id=9919 |
| + | |gene_name="SEC16 homolog A, endoplasmic reticulum export factor" | ||
| + | |gene_source=HGNC:29006 | ||
| + | |gene_symbol=SEC16A | ||
| + | |gene_synonyms=Sec16L p250 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29006 | ||
|nearest_ensembl=ENSG00000148396 | |nearest_ensembl=ENSG00000148396 | ||
|nearest_promoter_id=NM_001276418 | |nearest_promoter_id=NM_001276418 | ||
|nearest_refseq=NM_014866 | |nearest_refseq=NM_014866 | ||
|nearest_unigene=Hs.522500 | |nearest_unigene=Hs.522500 | ||
| + | |num_trans=4 | ||
| + | |p250= | ||
| + | |species=human | ||
| + | |start=136483753 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000290037.10 NM_001276418 uc010nbn.4 AB593115 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103167.1 | |tss_id=hg_103167.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F1T0I1 O15027 | ||
}} | }} | ||
Revision as of 19:57, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000290037.10 NM_001276418 uc010nbn.4 AB593115 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000290037.10:0 NM_001276418:0 uc010nbn.4:0 AB593115:0 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_001276418 |
| Entrez ID: | 9919 |
| Nearest Unigene: | Hs.522500 |
| Nearest Refseq: | NM_014866 |
| Nearest Ensembl: | ENSG00000148396 |
| Gene Name: | "SEC16 homolog A, endoplasmic reticulum export factor" |
| Gene Alias: | KIAA0310 |
| Gene Description: | "SEC16 homolog A, endoplasmic reticulum export factor" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
