Difference between revisions of "TSS:Hg 103216.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=43 |entrez_id=389812 |gc_percent=0.641791 |gene_alias=PRO6093|UNQ2541 |gene_description=lipocalin 15 |gene_name=LCN15 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |UNQ2541= | ||
| + | |all_trans=ENST00000495223.1:0 uc064xdv.1:0 BC093893:-24 BC093895:-24 ENST00000316144.5:-29 NM_203347:-29 uc004cjd.3:-29 AY358618:-29 KJ904269:473 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
| + | |end=136764484 | ||
|entrez_id=389812 | |entrez_id=389812 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=PRO6093|UNQ2541 | |gene_alias=PRO6093|UNQ2541 | ||
|gene_description=lipocalin 15 | |gene_description=lipocalin 15 | ||
| − | |gene_name=LCN15 | + | |gene_id=389812 |
| + | |gene_name=lipocalin 15 | ||
| + | |gene_source=HGNC:33777 | ||
| + | |gene_symbol=LCN15 | ||
| + | |gene_synonyms=PRO6093 UNQ2541 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33777 | ||
|nearest_ensembl=ENSG00000177984 | |nearest_ensembl=ENSG00000177984 | ||
|nearest_promoter_id=NM_203347 | |nearest_promoter_id=NM_203347 | ||
|nearest_refseq=NM_203347 | |nearest_refseq=NM_203347 | ||
|nearest_unigene=Hs.413902 | |nearest_unigene=Hs.413902 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=136764456 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000495223.1 uc064xdv.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103216.1 | |tss_id=hg_103216.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:59, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000495223.1 uc064xdv.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000495223.1:0 uc064xdv.1:0 BC093893:-24 BC093895:-24 ENST00000316144.5:-29 NM_203347:-29 uc004cjd.3:-29 AY358618:-29 KJ904269:473 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_203347 |
| Entrez ID: | 389812 |
| Nearest Unigene: | Hs.413902 |
| Nearest Refseq: | NM_203347 |
| Nearest Ensembl: | ENSG00000177984 |
| Gene Name: | lipocalin 15 |
| Gene Alias: | PRO6093 |
| Gene Description: | lipocalin 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
