Difference between revisions of "TSS:Hg 103242.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=100 |entrez_id=54461 |gc_percent=0.80597 |gene_alias=Fbw5 |gene_description=F-box and WD repeat domain containing 5 |gene_name=F...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000325285.7:0 ENST00000483559.5:0 ENST00000491246.4:0 ENST00000428398.5:0 uc004cjx.4:0 uc064xfn.1:0 uc064xfq.1:0 uc064xfr.1:0 BC014297:0 BC014130:0 BC035355:0 AK026081:0 AK315738:0 ENST00000459905.5:-1 uc064xfo.1:-1 BC031100:-1 NM_018998:-59 ENST00000443788.1:79 uc064xfs.1:79 ENST00000480818.3:458 uc064xfp.1:458 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=0 | ||
|distance_to_tss=100 | |distance_to_tss=100 | ||
| + | |end=136944695 | ||
|entrez_id=54461 | |entrez_id=54461 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=Fbw5 | |gene_alias=Fbw5 | ||
|gene_description=F-box and WD repeat domain containing 5 | |gene_description=F-box and WD repeat domain containing 5 | ||
| − | |gene_name=FBXW5 | + | |gene_id=54461 |
| + | |gene_name=F-box and WD repeat domain containing 5 | ||
| + | |gene_source=HGNC:13613 | ||
| + | |gene_symbol=FBXW5 | ||
| + | |gene_synonyms=DKFZP434B205 Fbw5 MGC20962 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13613 | ||
|nearest_ensembl=ENSG00000159069 | |nearest_ensembl=ENSG00000159069 | ||
|nearest_promoter_id=NM_018998 | |nearest_promoter_id=NM_018998 | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=136944612 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000325285.7 ENST00000483559.5 ENST00000491246.4 ENST00000428398.5 uc004cjx.4 uc064xfn.1 uc064xfq.1 uc064xfr.1 BC014297 BC014130 BC035355 AK026081 AK315738 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103242.1 | |tss_id=hg_103242.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R8H7 A0A096LP04 A0A0A0MSV8 Q969U6 | ||
}} | }} | ||
Revision as of 20:01, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000325285.7 ENST00000483559.5 ENST00000491246.4 ENST00000428398.5 uc004cjx.4 uc064xfn.1 uc064xfq.1 uc064xfr.1 BC014297 BC014130 BC035355 AK026081 AK315738 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000325285.7:0 ENST00000483559.5:0 ENST00000491246.4:0 ENST00000428398.5:0 uc004cjx.4:0 uc064xfn.1:0 uc064xfq.1:0 uc064xfr.1:0 BC014297:0 BC014130:0 BC035355:0 AK026081:0 AK315738:0 ENST00000459905.5:-1 uc064xfo.1:-1 BC031100:-1 NM_018998:-59 ENST00000443788.1:79 uc064xfs.1:79 ENST00000480818.3:458 uc064xfp.1:458 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
