Difference between revisions of "TSS:Hg 103311.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-9369 |entrez_id=2902 |gc_percent=0.701493 |gene_alias=GluN1|MRD8|NMD-R1|NMDA1|NMDAR1|NR1 |gene_description=glutamate ionotropi...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MRD8= | ||
| + | |NMD-R1= | ||
| + | |NMDA1= | ||
| + | |NMDAR1= | ||
| + | |NR1= | ||
| + | |all_trans=BC018639:-59 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-59 | ||
|distance_to_tss=-9369 | |distance_to_tss=-9369 | ||
| + | |end=137129801 | ||
|entrez_id=2902 | |entrez_id=2902 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_000832 | |nearest_refseq=NM_000832 | ||
|nearest_unigene=Hs.558334 | |nearest_unigene=Hs.558334 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=137129775 | ||
| + | |strand=- | ||
| + | |transcript_name=BC018639 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103311.1 | |tss_id=hg_103311.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC018639 |
|---|---|
| Distance: | -59 |
| Num_trans: | 1 |
| All_trans: | BC018639:-59 |
TATA-Box annotation
| Distance to TSS: | -9369 |
|---|---|
| Nearest PromoterID: | NM_001185090 |
| Entrez ID: | 2902 |
| Nearest Unigene: | Hs.558334 |
| Nearest Refseq: | NM_000832 |
| Nearest Ensembl: | ENSG00000176884 |
| Gene Name: | GRIN1 |
| Gene Alias: | GluN1 |
| Gene Description: | glutamate ionotropic receptor NMDA type subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
