Difference between revisions of "TSS:Hg 103323.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=136 |entrez_id=389816 |gc_percent=0.781095 |gene_alias=CAPC|bA350O14.10 |gene_description=leucine rich repeat containing 26 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ355157:-66 BC140911:-99 NM_001013653:-130 ENST00000371542.3:-142 uc004clp.4:-142 EU588721:468 | ||
| + | |bA350O14.10= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=-66 | ||
|distance_to_tss=136 | |distance_to_tss=136 | ||
| + | |end=137169909 | ||
|entrez_id=389816 | |entrez_id=389816 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=CAPC|bA350O14.10 | |gene_alias=CAPC|bA350O14.10 | ||
|gene_description=leucine rich repeat containing 26 | |gene_description=leucine rich repeat containing 26 | ||
| − | |gene_name=LRRC26 | + | |gene_id=389816 |
| + | |gene_name=leucine rich repeat containing 26 | ||
| + | |gene_source=HGNC:31409 | ||
| + | |gene_symbol=LRRC26 | ||
| + | |gene_synonyms=OTTHUMG00000020980 bA350O14.10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31409 | ||
|nearest_ensembl=ENSG00000184709 | |nearest_ensembl=ENSG00000184709 | ||
|nearest_promoter_id=NM_001013653 | |nearest_promoter_id=NM_001013653 | ||
|nearest_refseq=NM_001013653 | |nearest_refseq=NM_001013653 | ||
|nearest_unigene=Hs.669977 | |nearest_unigene=Hs.669977 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=137169897 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ355157 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103323.1 | |tss_id=hg_103323.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ355157 |
|---|---|
| Distance: | -66 |
| Num_trans: | 6 |
| All_trans: | DQ355157:-66 BC140911:-99 NM_001013653:-130 ENST00000371542.3:-142 uc004clp.4:-142 EU588721:468 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NM_001013653 |
| Entrez ID: | 389816 |
| Nearest Unigene: | Hs.669977 |
| Nearest Refseq: | NM_001013653 |
| Nearest Ensembl: | ENSG00000184709 |
| Gene Name: | leucine rich repeat containing 26 |
| Gene Alias: | CAPC |
| Gene Description: | leucine rich repeat containing 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
