Difference between revisions of "TSS:Hg 10348.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=1324 |entrez_id=26829 |gc_percent=0.587065 |gene_alias=RNU5E|U5E |gene_description="RNA, U5E small nuclear 1" |gene_name=RNU5E-1...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |U5E= | ||
| + | |all_trans=uc057cii.1:-447 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=-447 | ||
|distance_to_tss=1324 | |distance_to_tss=1324 | ||
| + | |end=11909480 | ||
|entrez_id=26829 | |entrez_id=26829 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_002754 | |nearest_refseq=NR_002754 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=11909476 | ||
| + | |strand=- | ||
| + | |transcript_name=uc057cii.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10348.1 | |tss_id=hg_10348.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:11, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | uc057cii.1 |
|---|---|
| Distance: | -447 |
| Num_trans: | 1 |
| All_trans: | uc057cii.1:-447 |
TATA-Box annotation
| Distance to TSS: | 1324 |
|---|---|
| Nearest PromoterID: | NR_002754 |
| Entrez ID: | 26829 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_002754 |
| Nearest Ensembl: | ENSG00000199347 |
| Gene Name: | RNU5E-1 |
| Gene Alias: | RNU5E |
| Gene Description: | "RNA, U5E small nuclear 1" |
| Gene Type: | snRNA |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
