Difference between revisions of "TSS:Hg 103602.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=39 |entrez_id=83592 |gc_percent=0.711443 |gene_alias=AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR |gene_description=aldo-keto reductase fam...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AKRDC1= | ||
| + | |LoopADR= | ||
| + | |all_trans=ENST00000463345.5:2 uc057rhx.1:2 BC002862:2 ENST00000298375.11:22 uc001ihi.5:22 ENST00000525281.5:23 uc057rhy.1:23 AK302155:23 ENST00000474119.5:-24 NR_073125:-24 NM_001271025:-24 NM_001271021:-24 NM_001040177:-24 NR_073127:-24 NR_073126:-24 uc031ptd.2:-24 AK074211:-24 ENST00000525627.1:54 uc057rhz.1:54 ENST00000532248.5:64 ENST00000345253.9:64 ENST00000334019.4:64 uc057ria.1:64 uc001ihk.5:64 uc009xhw.5:64 AB040820:64 AB040821:64 AB040822:64 BC023972:-70 AF263242:73 CU678252:90 HQ447817:90 KJ903349:90 AB055603:93 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=2 | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
| + | |end=4826232 | ||
|entrez_id=83592 | |entrez_id=83592 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR | |gene_alias=AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR | ||
|gene_description=aldo-keto reductase family 1 member E2 | |gene_description=aldo-keto reductase family 1 member E2 | ||
| − | |gene_name=AKR1E2 | + | |gene_id=83592 |
| + | |gene_name="aldo-keto reductase family 1, member E2" | ||
| + | |gene_source=HGNC:23437 | ||
| + | |gene_symbol=AKR1E2 | ||
| + | |gene_synonyms=MGC10612 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hTSP= | ||
| + | |hgnc_mgi_id=HGNC:23437 | ||
| + | |htAKR= | ||
|nearest_ensembl=ENSG00000165568 | |nearest_ensembl=ENSG00000165568 | ||
|nearest_promoter_id=NM_001040177 | |nearest_promoter_id=NM_001040177 | ||
|nearest_refseq=NM_031436 | |nearest_refseq=NM_031436 | ||
|nearest_unigene=Hs.657944 | |nearest_unigene=Hs.657944 | ||
| + | |num_trans=34 | ||
| + | |species=human | ||
| + | |start=4826200 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000463345.5 uc057rhx.1 BC002862 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103602.1 | |tss_id=hg_103602.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96JD6 | ||
}} | }} | ||
Revision as of 20:16, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463345.5 uc057rhx.1 BC002862 |
|---|---|
| Distance: | 2 |
| Num_trans: | 34 |
| All_trans: | ENST00000463345.5:2 uc057rhx.1:2 BC002862:2 ENST00000298375.11:22 uc001ihi.5:22 ENST00000525281.5:23 uc057rhy.1:23 AK302155:23 ENST00000474119.5:-24 NR_073125:-24 NM_001271025:-24 NM_001271021:-24 NM_001040177:-24 NR_073127:-24 NR_073126:-24 uc031ptd.2:-24 AK074211:-24 ENST00000525627.1:54 uc057rhz.1:54 ENST00000532248.5:64 ENST00000345253.9:64 ENST00000334019.4:64 uc057ria.1:64 uc001ihk.5:64 uc009xhw.5:64 AB040820:64 AB040821:64 AB040822:64 BC023972:-70 AF263242:73 CU678252:90 HQ447817:90 KJ903349:90 AB055603:93 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001040177 |
| Entrez ID: | 83592 |
| Nearest Unigene: | Hs.657944 |
| Nearest Refseq: | NM_031436 |
| Nearest Ensembl: | ENSG00000165568 |
| Gene Name: | "aldo-keto reductase family 1, member E2" |
| Gene Alias: | AKR1CL2 |
| Gene Description: | aldo-keto reductase family 1 member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
