Difference between revisions of "TSS:Hg 103644.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=3666 |entrez_id=10276 |gc_percent=0.353234 |gene_alias=ARHGEF8|NET1A |gene_description=neuroepithelial cell transforming 1 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NET1A= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=3666 | |distance_to_tss=3666 | ||
| + | |end=5450223 | ||
|entrez_id=10276 | |entrez_id=10276 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_005863 | |nearest_refseq=NM_005863 | ||
|nearest_unigene=Hs.25155 | |nearest_unigene=Hs.25155 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=5450210 | ||
| + | |strand=+ | ||
|tata_box="17(GCCTCTTAAAGC,-,0.00),18(CCTCTTAAAGCC,+,0.00)" | |tata_box="17(GCCTCTTAAAGC,-,0.00),18(CCTCTTAAAGCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103644.1 | |tss_id=hg_103644.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 3666 |
|---|---|
| Nearest PromoterID: | NR_073040 |
| Entrez ID: | 10276 |
| Nearest Unigene: | Hs.25155 |
| Nearest Refseq: | NM_005863 |
| Nearest Ensembl: | ENSG00000173848 |
| Gene Name: | NET1 |
| Gene Alias: | ARHGEF8 |
| Gene Description: | neuroepithelial cell transforming 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "17(GCCTCTTAAAGC,-,0.00),18(CCTCTTAAAGCC,+,0.00)" |
