Difference between revisions of "TSS:Hg 103654.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=7979 |entrez_id=54906 |gc_percent=0.731343 |gene_alias=C10orf18|bA318E3.2 |gene_description=family with sequence similarity 208...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000532424.5:0 uc057rkb.1:0 AB621821:-191 | ||
| + | |bA318E3.2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=7979 | |distance_to_tss=7979 | ||
| + | |end=5692841 | ||
|entrez_id=54906 | |entrez_id=54906 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=C10orf18|bA318E3.2 | |gene_alias=C10orf18|bA318E3.2 | ||
|gene_description=family with sequence similarity 208 member B | |gene_description=family with sequence similarity 208 member B | ||
| − | |gene_name=FAM208B | + | |gene_id=54906 |
| + | |gene_name=family with sequence similarity 208 member B | ||
| + | |gene_source=HGNC:23484 | ||
| + | |gene_symbol=FAM208B | ||
| + | |gene_synonyms=FLJ20360 KIAA2006 bA318E3.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23484 | ||
|nearest_ensembl=ENSG00000108021 | |nearest_ensembl=ENSG00000108021 | ||
|nearest_promoter_id=NM_001321785 | |nearest_promoter_id=NM_001321785 | ||
|nearest_refseq=NM_017782 | |nearest_refseq=NM_017782 | ||
|nearest_unigene=Hs.610717 | |nearest_unigene=Hs.610717 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=5692793 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000532424.5 uc057rkb.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103654.1 | |tss_id=hg_103654.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000532424.5 uc057rkb.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000532424.5:0 uc057rkb.1:0 AB621821:-191 |
TATA-Box annotation
| Distance to TSS: | 7979 |
|---|---|
| Nearest PromoterID: | NM_001321785 |
| Entrez ID: | 54906 |
| Nearest Unigene: | Hs.610717 |
| Nearest Refseq: | NM_017782 |
| Nearest Ensembl: | ENSG00000108021 |
| Gene Name: | family with sequence similarity 208 member B |
| Gene Alias: | C10orf18 |
| Gene Description: | family with sequence similarity 208 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
