Difference between revisions of "TSS:Hg 103706.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=87836 |entrez_id=5588 |gc_percent=0.442786 |gene_alias=PRKCT|nPKC-theta |gene_description=protein kinase C theta |gene_name=PRKC...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance= | ||
|distance_to_tss=87836 | |distance_to_tss=87836 | ||
| + | |end=6492474 | ||
|entrez_id=5588 | |entrez_id=5588 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| Line 8: | Line 11: | ||
|gene_name=PRKCQ | |gene_name=PRKCQ | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |nPKC-theta= | ||
|nearest_ensembl=ENSG00000065675 | |nearest_ensembl=ENSG00000065675 | ||
|nearest_promoter_id=NM_001323267 | |nearest_promoter_id=NM_001323267 | ||
|nearest_refseq=NM_006257 | |nearest_refseq=NM_006257 | ||
|nearest_unigene=Hs.498570 | |nearest_unigene=Hs.498570 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=6492455 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103706.1 | |tss_id=hg_103706.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:20, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 87836 |
|---|---|
| Nearest PromoterID: | NM_001323267 |
| Entrez ID: | 5588 |
| Nearest Unigene: | Hs.498570 |
| Nearest Refseq: | NM_006257 |
| Nearest Ensembl: | ENSG00000065675 |
| Gene Name: | PRKCQ |
| Gene Alias: | PRKCT |
| Gene Description: | protein kinase C theta |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
