Difference between revisions of "TSS:Hg 103753.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-36 |entrez_id=3698 |gc_percent=0.40796 |gene_alias=H2P|SHAP |gene_description=inter-alpha-trypsin inhibitor heavy chain 2 |gene...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SHAP= | ||
| + | |all_trans=ENST00000358415.8:27 uc001ijs.4:27 NM_002216:31 AK291379:84 ENST00000473227.5:104 uc057ror.1:104 ENST00000480387.1:126 uc057ros.1:126 AK297334:126 AK225329:126 ENST00000613369.4:130 uc057rot.1:130 X07173:132 ENST00000429820.5:138 uc057rou.1:138 BC132685:144 ENST00000379587.4:158 uc057rov.1:158 AK225277:168 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=27 | ||
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
| + | |end=7703242 | ||
|entrez_id=3698 | |entrez_id=3698 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=H2P|SHAP | |gene_alias=H2P|SHAP | ||
|gene_description=inter-alpha-trypsin inhibitor heavy chain 2 | |gene_description=inter-alpha-trypsin inhibitor heavy chain 2 | ||
| − | |gene_name=ITIH2 | + | |gene_id=3698 |
| + | |gene_name=inter-alpha-trypsin inhibitor heavy chain 2 | ||
| + | |gene_source=HGNC:6167 | ||
| + | |gene_symbol=ITIH2 | ||
| + | |gene_synonyms=H2P | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6167 | ||
|nearest_ensembl=ENSG00000151655 | |nearest_ensembl=ENSG00000151655 | ||
|nearest_promoter_id=NM_002216 | |nearest_promoter_id=NM_002216 | ||
|nearest_refseq=NM_002216 | |nearest_refseq=NM_002216 | ||
|nearest_unigene=Hs.75285 | |nearest_unigene=Hs.75285 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=7703232 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000358415.8 uc001ijs.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103753.1 | |tss_id=hg_103753.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P19823 | ||
}} | }} | ||
Revision as of 20:23, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358415.8 uc001ijs.4 |
|---|---|
| Distance: | 27 |
| Num_trans: | 19 |
| All_trans: | ENST00000358415.8:27 uc001ijs.4:27 NM_002216:31 AK291379:84 ENST00000473227.5:104 uc057ror.1:104 ENST00000480387.1:126 uc057ros.1:126 AK297334:126 AK225329:126 ENST00000613369.4:130 uc057rot.1:130 X07173:132 ENST00000429820.5:138 uc057rou.1:138 BC132685:144 ENST00000379587.4:158 uc057rov.1:158 AK225277:168 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NM_002216 |
| Entrez ID: | 3698 |
| Nearest Unigene: | Hs.75285 |
| Nearest Refseq: | NM_002216 |
| Nearest Ensembl: | ENSG00000151655 |
| Gene Name: | inter-alpha-trypsin inhibitor heavy chain 2 |
| Gene Alias: | H2P |
| Gene Description: | inter-alpha-trypsin inhibitor heavy chain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
