Difference between revisions of "TSS:Hg 103773.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=87451 |entrez_id=399717 |gc_percent=0.442786 |gene_alias=- |gene_description=GATA3 antisense RNA 1 |gene_name=GATA3-AS1 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC024661:-220 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-220 | ||
|distance_to_tss=87451 | |distance_to_tss=87451 | ||
| + | |end=7965051 | ||
|entrez_id=399717 | |entrez_id=399717 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=GATA3 antisense RNA 1 | |gene_description=GATA3 antisense RNA 1 | ||
| − | |gene_name= | + | |gene_id=83860 |
| + | |gene_name=TATA-box binding protein associated factor 3 | ||
| + | |gene_source=HGNC:17303 | ||
| + | |gene_symbol=TAF3 | ||
| + | |gene_synonyms=TAF140 TAFII140 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:17303 | ||
|nearest_ensembl=ENSG00000197308 | |nearest_ensembl=ENSG00000197308 | ||
|nearest_promoter_id=NR_104329 | |nearest_promoter_id=NR_104329 | ||
|nearest_refseq=NM_207423 | |nearest_refseq=NM_207423 | ||
|nearest_unigene=Hs.158992 | |nearest_unigene=Hs.158992 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=7965029 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC024661 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103773.1 | |tss_id=hg_103773.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:23, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC024661 |
|---|---|
| Distance: | -220 |
| Num_trans: | 1 |
| All_trans: | BC024661:-220 |
TATA-Box annotation
| Distance to TSS: | 87451 |
|---|---|
| Nearest PromoterID: | NR_104329 |
| Entrez ID: | 399717 |
| Nearest Unigene: | Hs.158992 |
| Nearest Refseq: | NM_207423 |
| Nearest Ensembl: | ENSG00000197308 |
| Gene Name: | TATA-box binding protein associated factor 3 |
| Gene Alias: | - |
| Gene Description: | GATA3 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
