Difference between revisions of "TSS:Hg 103790.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-21 |entrez_id=2625 |gc_percent=0.547264 |gene_alias=HDR|HDRS |gene_description=GATA binding protein 3 |gene_name=GATA3 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HDRS= | ||
| + | |all_trans=ENST00000379328.7:0 uc001ijz.4:0 NM_002051:7 NM_001002295:7 BC006793:7 ENST00000346208.3:109 uc001ika.4:109 BC003070:113 AK298213:118 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=0 | ||
|distance_to_tss=-21 | |distance_to_tss=-21 | ||
| + | |end=8054697 | ||
|entrez_id=2625 | |entrez_id=2625 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=HDR|HDRS | |gene_alias=HDR|HDRS | ||
|gene_description=GATA binding protein 3 | |gene_description=GATA binding protein 3 | ||
| − | |gene_name=GATA3 | + | |gene_id=2625 |
| + | |gene_name=GATA binding protein 3 | ||
| + | |gene_source=HGNC:4172 | ||
| + | |gene_symbol=GATA3 | ||
| + | |gene_synonyms=HDR | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4172 | ||
|nearest_ensembl=ENSG00000107485 | |nearest_ensembl=ENSG00000107485 | ||
|nearest_promoter_id=NM_002051 | |nearest_promoter_id=NM_002051 | ||
|nearest_refseq=NM_002051 | |nearest_refseq=NM_002051 | ||
|nearest_unigene=Hs.524134 | |nearest_unigene=Hs.524134 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=8054668 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000379328.7 uc001ijz.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103790.1 | |tss_id=hg_103790.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P23771 | ||
}} | }} | ||
Revision as of 20:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379328.7 uc001ijz.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000379328.7:0 uc001ijz.4:0 NM_002051:7 NM_001002295:7 BC006793:7 ENST00000346208.3:109 uc001ika.4:109 BC003070:113 AK298213:118 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_002051 |
| Entrez ID: | 2625 |
| Nearest Unigene: | Hs.524134 |
| Nearest Refseq: | NM_002051 |
| Nearest Ensembl: | ENSG00000107485 |
| Gene Name: | GATA binding protein 3 |
| Gene Alias: | HDR |
| Gene Description: | GATA binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
