Difference between revisions of "TSS:Hg 103917.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=16 |entrez_id=57118 |gc_percent=0.726368 |gene_alias=CKLiK|CaM-K1|CaMKID |gene_description=calcium/calmodulin dependent protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CaM-K1= | ||
| + | |CaMKID= | ||
| + | |all_trans=NM_153498:0 NM_020397:0 AK289393:0 AB081726:2 ENST00000619168.4:-52 uc001ilp.5:-52 ENST00000487696.1:67 uc057rtb.1:67 BC035745:141 ENST00000378845.5:148 uc001iln.4:148 AF286366:148 CU690184:231 AB528894:231 KJ899309:231 KJ905511:231 DQ892464:232 DQ895676:232 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
| + | |end=12349585 | ||
|entrez_id=57118 | |entrez_id=57118 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=CKLiK|CaM-K1|CaMKID | |gene_alias=CKLiK|CaM-K1|CaMKID | ||
|gene_description=calcium/calmodulin dependent protein kinase ID | |gene_description=calcium/calmodulin dependent protein kinase ID | ||
| − | |gene_name=CAMK1D | + | |gene_id=57118 |
| + | |gene_name=calcium/calmodulin dependent protein kinase ID | ||
| + | |gene_source=HGNC:19341 | ||
| + | |gene_symbol=CAMK1D | ||
| + | |gene_synonyms=CKLiK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19341 | ||
|nearest_ensembl=ENSG00000183049 | |nearest_ensembl=ENSG00000183049 | ||
|nearest_promoter_id=NM_153498 | |nearest_promoter_id=NM_153498 | ||
|nearest_refseq=NM_020397 | |nearest_refseq=NM_020397 | ||
|nearest_unigene=Hs.600547 | |nearest_unigene=Hs.600547 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=12349533 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_153498 NM_020397 AK289393 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103917.1 | |tss_id=hg_103917.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IU85 | ||
}} | }} | ||
Revision as of 20:30, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_153498 NM_020397 AK289393 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | NM_153498:0 NM_020397:0 AK289393:0 AB081726:2 ENST00000619168.4:-52 uc001ilp.5:-52 ENST00000487696.1:67 uc057rtb.1:67 BC035745:141 ENST00000378845.5:148 uc001iln.4:148 AF286366:148 CU690184:231 AB528894:231 KJ899309:231 KJ905511:231 DQ892464:232 DQ895676:232 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_153498 |
| Entrez ID: | 57118 |
| Nearest Unigene: | Hs.600547 |
| Nearest Refseq: | NM_020397 |
| Nearest Ensembl: | ENSG00000183049 |
| Gene Name: | calcium/calmodulin dependent protein kinase ID |
| Gene Alias: | CKLiK |
| Gene Description: | calcium/calmodulin dependent protein kinase ID |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
