Difference between revisions of "TSS:Hg 103980.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=8 |entrez_id=51182 |gc_percent=0.626866 |gene_alias=HSP70-4|HSP70L1 |gene_description=heat shock protein family A (Hsp70) membe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSP70L1= | ||
| + | |all_trans=ENST00000378372.7:0 NM_016299:0 NM_001278205:0 NR_103464:0 uc001inf.5:0 BC108738:49 ENST00000493863.5:52 uc057ryj.1:52 ENST00000437161.6:125 uc001ine.5:125 AK302452:139 AK225265:139 AK225651:139 AK000880:142 BC065281:152 BC038845:153 ENST00000493178.1:154 uc057ryk.1:154 BC119690:164 BC119691:164 AF112210:164 AF143723:173 AK292323:175 AB528152:225 AB587406:225 KJ902567:225 KJ893846:225 ENST00000441647.1:260 uc057ryl.1:260 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
| + | |end=14838177 | ||
|entrez_id=51182 | |entrez_id=51182 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=HSP70-4|HSP70L1 | |gene_alias=HSP70-4|HSP70L1 | ||
|gene_description=heat shock protein family A (Hsp70) member 14 | |gene_description=heat shock protein family A (Hsp70) member 14 | ||
| − | |gene_name=HSPA14 | + | |gene_id=51182 |
| + | |gene_name=heat shock protein family A (Hsp70) member 14 | ||
| + | |gene_source=HGNC:29526 | ||
| + | |gene_symbol=HSPA14 | ||
| + | |gene_synonyms=HSP70-4 HSP70L1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29526 | ||
|nearest_ensembl=ENSG00000187522 | |nearest_ensembl=ENSG00000187522 | ||
|nearest_promoter_id=NR_103464 | |nearest_promoter_id=NR_103464 | ||
|nearest_refseq=NM_016299 | |nearest_refseq=NM_016299 | ||
|nearest_unigene=Hs.534169 | |nearest_unigene=Hs.534169 | ||
| + | |num_trans=29 | ||
| + | |species=human | ||
| + | |start=14838158 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000378372.7 NM_016299 NM_001278205 NR_103464 uc001inf.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103980.1 | |tss_id=hg_103980.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q0VDF9 Q8TAQ0 | ||
}} | }} | ||
Revision as of 20:32, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378372.7 NM_016299 NM_001278205 NR_103464 uc001inf.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000378372.7:0 NM_016299:0 NM_001278205:0 NR_103464:0 uc001inf.5:0 BC108738:49 ENST00000493863.5:52 uc057ryj.1:52 ENST00000437161.6:125 uc001ine.5:125 AK302452:139 AK225265:139 AK225651:139 AK000880:142 BC065281:152 BC038845:153 ENST00000493178.1:154 uc057ryk.1:154 BC119690:164 BC119691:164 AF112210:164 AF143723:173 AK292323:175 AB528152:225 AB587406:225 KJ902567:225 KJ893846:225 ENST00000441647.1:260 uc057ryl.1:260 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_103464 |
| Entrez ID: | 51182 |
| Nearest Unigene: | Hs.534169 |
| Nearest Refseq: | NM_016299 |
| Nearest Ensembl: | ENSG00000187522 |
| Gene Name: | heat shock protein family A (Hsp70) member 14 |
| Gene Alias: | HSP70-4 |
| Gene Description: | heat shock protein family A (Hsp70) member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
