Difference between revisions of "TSS:Hg 104024.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=106140 |entrez_id=8029 |gc_percent=0.40796 |gene_alias=IFCR|MGA1|gp280 |gene_description=cubilin |gene_name=CUBN |gene_type=prot...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MGA1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=106140 | |distance_to_tss=106140 | ||
| + | |end=17023683 | ||
|entrez_id=8029 | |entrez_id=8029 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 8: | Line 12: | ||
|gene_name=CUBN | |gene_name=CUBN | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |gp280= | ||
|nearest_ensembl=ENSG00000107611 | |nearest_ensembl=ENSG00000107611 | ||
|nearest_promoter_id=NM_001081 | |nearest_promoter_id=NM_001081 | ||
|nearest_refseq=NM_001081 | |nearest_refseq=NM_001081 | ||
|nearest_unigene=Hs.166206 | |nearest_unigene=Hs.166206 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=17023670 | ||
| + | |strand=+ | ||
|tata_box="-7(GCTTTTAGAGAG,+,0.00)" | |tata_box="-7(GCTTTTAGAGAG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104024.1 | |tss_id=hg_104024.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:34, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 106140 |
|---|---|
| Nearest PromoterID: | NM_001081 |
| Entrez ID: | 8029 |
| Nearest Unigene: | Hs.166206 |
| Nearest Refseq: | NM_001081 |
| Nearest Ensembl: | ENSG00000107611 |
| Gene Name: | CUBN |
| Gene Alias: | IFCR |
| Gene Description: | cubilin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(GCTTTTAGAGAG,+,0.00)" |
