Difference between revisions of "TSS:Hg 104040.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=1058 |entrez_id=1787 |gc_percent=0.442786 |gene_alias=DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 |gene_description=tRNA aspartic acid meth...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DNMT2= | ||
| + | |MHSAIIP= | ||
| + | |PUMET= | ||
| + | |RNMT1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance= | ||
|distance_to_tss=1058 | |distance_to_tss=1058 | ||
| + | |end=17201022 | ||
|entrez_id=1787 | |entrez_id=1787 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_004412 | |nearest_refseq=NM_004412 | ||
|nearest_unigene=Hs.351665 | |nearest_unigene=Hs.351665 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=17201004 | ||
| + | |strand=+ | ||
|tata_box="-100(CTTTTAAAACCA,+,0.00)" | |tata_box="-100(CTTTTAAAACCA,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104040.1 | |tss_id=hg_104040.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:35, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1058 |
|---|---|
| Nearest PromoterID: | NM_001321007 |
| Entrez ID: | 1787 |
| Nearest Unigene: | Hs.351665 |
| Nearest Refseq: | NM_004412 |
| Nearest Ensembl: | ENSG00000107614 |
| Gene Name: | TRDMT1 |
| Gene Alias: | DMNT2 |
| Gene Description: | tRNA aspartic acid methyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(CTTTTAAAACCA,+,0.00)" |
