Difference between revisions of "TSS:Hg 104098.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=83 |entrez_id=8027 |gc_percent=0.646766 |gene_alias=STAM-1|STAM1 |gene_description=signal transducing adaptor molecule |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |STAM1= | ||
| + | |all_trans=ENST00000445846.1:0 ENST00000377500.1:0 uc057sbp.1:0 uc057sbq.1:0 BC030586:-13 AK314405:20 AK303083:44 ENST00000377524.7:-70 NR_037774:-70 NM_003473:-70 uc001ipj.3:-70 U43899:77 CU688920:119 AB590764:119 KJ901858:119 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
| + | |end=17644221 | ||
|entrez_id=8027 | |entrez_id=8027 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=STAM-1|STAM1 | |gene_alias=STAM-1|STAM1 | ||
|gene_description=signal transducing adaptor molecule | |gene_description=signal transducing adaptor molecule | ||
| − | |gene_name=STAM | + | |gene_id=8027 |
| + | |gene_name=signal transducing adaptor molecule | ||
| + | |gene_source=HGNC:11357 | ||
| + | |gene_symbol=STAM | ||
| + | |gene_synonyms=STAM1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11357 | ||
|nearest_ensembl=ENSG00000136738 | |nearest_ensembl=ENSG00000136738 | ||
|nearest_promoter_id=NM_001324288 | |nearest_promoter_id=NM_001324288 | ||
|nearest_refseq=NM_003473 | |nearest_refseq=NM_003473 | ||
|nearest_unigene=Hs.335391 | |nearest_unigene=Hs.335391 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=17644194 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000445846.1 ENST00000377500.1 uc057sbp.1 uc057sbq.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104098.1 | |tss_id=hg_104098.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A6NMU3 C9J1E5 | ||
}} | }} | ||
Revision as of 20:37, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000445846.1 ENST00000377500.1 uc057sbp.1 uc057sbq.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000445846.1:0 ENST00000377500.1:0 uc057sbp.1:0 uc057sbq.1:0 BC030586:-13 AK314405:20 AK303083:44 ENST00000377524.7:-70 NR_037774:-70 NM_003473:-70 uc001ipj.3:-70 U43899:77 CU688920:119 AB590764:119 KJ901858:119 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_001324288 |
| Entrez ID: | 8027 |
| Nearest Unigene: | Hs.335391 |
| Nearest Refseq: | NM_003473 |
| Nearest Ensembl: | ENSG00000136738 |
| Gene Name: | signal transducing adaptor molecule |
| Gene Alias: | STAM-1 |
| Gene Description: | signal transducing adaptor molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
