Difference between revisions of "TSS:Hg 104487.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-390 |entrez_id=51322 |gc_percent=0.731343 |gene_alias=BM-016|DESSH|PRO1741|Wwp4 |gene_description=WW domain containing adaptor...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DESSH= | ||
| + | |PRO1741= | ||
| + | |Wwp4= | ||
| + | |all_trans=BC001654:78 ENST00000347934.8:206 uc001iug.4:206 BC001026:-301 ENST00000354911.8:312 uc001iuf.4:312 ENST00000375646.5:-313 uc057sli.1:-313 ENST00000532233.5:-318 uc057slh.1:-318 ENST00000528491.5:-321 uc057slg.1:-321 AK225846:-322 ENST00000526722.1:-324 uc057slf.1:-324 AK055852:-326 NM_016628:385 NM_100486:385 AK290174:393 AK223600:397 BC004258:398 ENST00000420266.5:399 uc057slj.1:399 ENST00000428935.5:433 ENST00000424454.5:433 uc057slk.1:433 uc057sll.1:433 AF116666:433 JF432760:471 KJ902580:471 AB590052:473 ENST00000530865.5:490 uc057slm.1:490 AK297460:490 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=78 | ||
|distance_to_tss=-390 | |distance_to_tss=-390 | ||
| + | |end=28533107 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| + | |num_trans=34 | ||
| + | |species=human | ||
| + | |start=28533096 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC001654 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104487.1 | |tss_id=hg_104487.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:54, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC001654 |
|---|---|
| Distance: | 78 |
| Num_trans: | 34 |
| All_trans: | BC001654:78 ENST00000347934.8:206 uc001iug.4:206 BC001026:-301 ENST00000354911.8:312 uc001iuf.4:312 ENST00000375646.5:-313 uc057sli.1:-313 ENST00000532233.5:-318 uc057slh.1:-318 ENST00000528491.5:-321 uc057slg.1:-321 AK225846:-322 ENST00000526722.1:-324 uc057slf.1:-324 AK055852:-326 NM_016628:385 NM_100486:385 AK290174:393 AK223600:397 BC004258:398 ENST00000420266.5:399 uc057slj.1:399 ENST00000428935.5:433 ENST00000424454.5:433 uc057slk.1:433 uc057sll.1:433 AF116666:433 JF432760:471 KJ902580:471 AB590052:473 ENST00000530865.5:490 uc057slm.1:490 AK297460:490 |
TATA-Box annotation
| Distance to TSS: | -390 |
|---|---|
| Nearest PromoterID: | NM_016628 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WAC |
| Gene Alias: | BM-016 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
